RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 MSLNLQ96KJ4 702 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 ZMAT2Q96NC0 199 aaKnown RBP7.12□□□□□ -1.27
TRAF4-213ENST00000578917 TSPAN18Q96SJ8 248 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 FIZ1Q96SL8 496 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 HAPLN2Q9GZV7 340 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 ADAM7Q9H2U9 754 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 PCIF1Q9H4Z3 704 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 GDPD2Q9HCC8 539 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 SLC39A2Q9NP94 309 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 CHST7Q9NS84 486 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 EXOC1Q9NV70 894 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 UBQLN1Q9UMX0 589 aaKnown RBP7.12□□□□□ -1.27
TRAF4-213ENST00000578917 SIP14410 1827 aa7.12□□□□□ -1.27
TRAF4-213ENST00000578917 PTPRSQ13332 1948 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 CCDC195A0A1B0GUA6 201 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 TTC26A0AVF1 554 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 GOLGA8IPA6NC78 632 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 ZNF233A6NK53 670 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 GOLGA8JA6NMD2 632 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 H7C4K7 107 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 ABLIM1O14639 778 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 LILRB3O75022 631 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 CLSTN1O94985 981 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 CYP3A5P20815 502 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 GARTP22102 1010 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 SP100P23497 879 aaPredicted RBP7.11□□□□□ -1.27
TRAF4-213ENST00000578917 CASP1P29466 404 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 ELF1P32519 619 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 MTHFRP42898 656 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 BRCC3P46736 316 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 CASP5P51878 434 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 NDUFA8P51970 172 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 TFAMQ00059 246 aaKnown RBP7.11□□□□□ -1.27
TRAF4-213ENST00000578917 SOX4Q06945 474 aaPredicted RBP7.11□□□□□ -1.27
TRAF4-213ENST00000578917 CUL4BQ13620 913 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 NAB2Q15742 525 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 CTXN3Q4LDR2 81 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 XKR4Q5GH76 650 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 RTP2Q5QGT7 225 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 JADE1Q6IE81 842 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 KANK3Q6NY19 840 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 SLC39A4Q6P5W5 647 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 SYCE2Q6PIF2 218 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 UNC13DQ70J99 1090 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 HS2ST1Q7LGA3 356 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 NELFCDQ8IXH7 590 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 GPR65Q8IYL9 337 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 RDH13Q8NBN7 331 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 KREMEN2Q8NCW0 462 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 LNX1Q8TBB1 728 aaPredicted RBP7.11□□□□□ -1.27
TRAF4-213ENST00000578917 SLC22A17Q8WUG5 538 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 PIK3R5Q8WYR1 880 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 NECTIN4Q96NY8 510 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 PHF7Q9BWX1 381 aaPredicted RBP7.11□□□□□ -1.27
TRAF4-213ENST00000578917 IKZF4Q9H2S9 585 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 PLEKHA4Q9H4M7 779 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 ASB7Q9H672 318 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 SFXN1Q9H9B4 322 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 RXFP1Q9HBX9 757 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 KIAA1586Q9HCI6 787 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 MAN1C1Q9NR34 630 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 DPP3Q9NY33 737 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 RBAKQ9NYW8 714 aaPredicted RBP7.11□□□□□ -1.27
TRAF4-213ENST00000578917 FNIP2Q9P278 1114 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 TUBGCP4Q9UGJ1 667 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 HOOK1Q9UJC3 728 aaKnown RBP7.11□□□□□ -1.27
TRAF4-213ENST00000578917 CPSF3Q9UKF6 684 aaKnown RBP7.11□□□□□ -1.27
TRAF4-213ENST00000578917 POLIQ9UNA4 740 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 NR2E1Q9Y466 385 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 LOXHD1Q8IVV2 1947 aa7.11□□□□□ -1.27
TRAF4-213ENST00000578917 A0A1W2PQ27 194 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 A0A1W2PQ64 194 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 A0A1W2PQD8 194 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 ARHGEF37A1IGU5 675 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 FRMD3A2A2Y4 597 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 TMEM189-UBE2V1I3L0A0 370 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 PRRG1O14668 218 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 SYN3O14994 580 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 KIAA0391O15091 583 aaKnown RBP7.1□□□□□ -1.27
TRAF4-213ENST00000578917 CLIC2O15247 247 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 EIF3DO15371 548 aaKnown RBP eCLIP7.1□□□□□ -1.27
TRAF4-213ENST00000578917 TGM5O43548 720 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 EXTL3O43909 919 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 ZNF202O95125 648 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 KIF20AO95235 890 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 MYL1P05976 194 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 KRT19P08727 400 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 ALADP13716 330 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 FGFR3P22607 806 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 TKTP29401 623 aaKnown RBP7.1□□□□□ -1.27
TRAF4-213ENST00000578917 ADSSP30520 456 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 CYP2J2P51589 502 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 GUCY2FP51841 1108 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 ZP2Q05996 745 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 PSMD2Q13200 908 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 KCNC3Q14003 757 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 PPM1LQ5SGD2 360 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 CNNM4Q6P4Q7 775 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 METTL23Q86XA0 190 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 GPD1LQ8N335 351 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms