RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 ATP8B3O60423 1300 aa18.23■□□□□ 0.51
SREBF1-218ENST00000578469 KAT6AQ92794 2004 aa18.23■□□□□ 0.51
SREBF1-218ENST00000578469 ABL1P00519 1130 aa18.23■□□□□ 0.51
SREBF1-218ENST00000578469 CLTAP09496 248 aa18.23■□□□□ 0.51
SREBF1-218ENST00000578469 PNMA6AP0CW24 399 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-218ENST00000578469 USP8P40818 1118 aa18.23■□□□□ 0.51
SREBF1-218ENST00000578469 DUOXA2Q1HG44 320 aa18.23■□□□□ 0.51
SREBF1-218ENST00000578469 TRIM60Q495X7 471 aa18.23■□□□□ 0.51
SREBF1-218ENST00000578469 GNASQ5JWF2 1037 aa18.23■□□□□ 0.51
SREBF1-218ENST00000578469 TDRD10Q5VZ19 366 aaKnown RBP18.23■□□□□ 0.51
SREBF1-218ENST00000578469 ALKBH5Q6P6C2 394 aaKnown RBP18.23■□□□□ 0.51
SREBF1-218ENST00000578469 NME8Q8N427 588 aa18.23■□□□□ 0.51
SREBF1-218ENST00000578469 RNF10Q8N5U6 811 aaKnown RBP18.23■□□□□ 0.51
SREBF1-218ENST00000578469 SHC3Q92529 594 aa18.23■□□□□ 0.51
SREBF1-218ENST00000578469 BADQ92934 168 aa18.23■□□□□ 0.51
SREBF1-218ENST00000578469 ALS2CR12Q96Q35 445 aa18.23■□□□□ 0.51
SREBF1-218ENST00000578469 IMPG2Q9BZV3 1241 aa18.23■□□□□ 0.51
SREBF1-218ENST00000578469 NAGPAQ9UK23 515 aa18.23■□□□□ 0.51
SREBF1-218ENST00000578469 MACROD2A1Z1Q3 448 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 TSPAN1O60635 241 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 SLU7O95391 586 aaKnown RBP18.22■□□□□ 0.51
SREBF1-218ENST00000578469 TNNC2P02585 160 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 IQCF3P0C7M6 154 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 ARF4P18085 180 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-218ENST00000578469 GTF2F1P35269 517 aaKnown RBP eCLIP18.22■□□□□ 0.51
SREBF1-218ENST00000578469 WNT7BP56706 349 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 NKX3-2P78367 333 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 IRX5P78411 483 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-218ENST00000578469 SNX17Q15036 470 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 KIZQ2M2Z5 673 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 FAM71AQ8IYT1 594 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 TRIM58Q8NG06 486 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 TATDN2Q93075 761 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 ANKRD36BP1Q96IX9 119 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 KREMEN1Q96MU8 473 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 AGPAT1Q99943 283 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 ADAMTS10Q9H324 1103 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 PDZD7Q9H5P4 517 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.22■□□□□ 0.513e-6■■■□□ 16.8
SREBF1-218ENST00000578469 INTUQ9ULD6 942 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 TFR2Q9UP52 801 aa18.22■□□□□ 0.51
SREBF1-218ENST00000578469 TMEM265A0A087WTH1 108 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 DDX3XO00571 662 aaKnown RBP eCLIP18.21■□□□□ 0.51
SREBF1-218ENST00000578469 B4GALT4O60513 344 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 H2AFZP0C0S5 128 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 TMEM191BP0C7N4 346 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 STAG3L1P0CL83 205 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 FOSL2P15408 326 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 TBXAS1P24557 533 aaPredicted RBP18.21■□□□□ 0.51
SREBF1-218ENST00000578469 ADAM17P78536 824 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 NCOA4Q13772 614 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 IFI16Q16666 785 aaKnown RBP18.21■□□□□ 0.51
SREBF1-218ENST00000578469 DCAF4L1Q3SXM0 396 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 C9orf50Q5SZB4 431 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 C1orf53Q5VUE5 145 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 H2AFVQ71UI9 128 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 CATSPER4Q7RTX7 472 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 OR5B17Q8NGF7 314 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 KAT5Q92993 513 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 CPB2Q96IY4 423 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 NOX5Q96PH1 765 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 PI4K2AQ9BTU6 479 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 HDAC6Q9UBN7 1215 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 PTPRJQ12913 1337 aa18.21■□□□□ 0.51
SREBF1-218ENST00000578469 VCANP13611 3396 aa18.21■□□□□ 0.5
SREBF1-218ENST00000578469 A0A1B0GUA9 196 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 BTNL10A8MVZ5 291 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 TREHO43280 583 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 GPR32O75388 356 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 CSDE1O75534 798 aaKnown RBP18.2■□□□□ 0.5
SREBF1-218ENST00000578469 CLSTN1O94985 981 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 VNN1O95497 513 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 NAP1L1P55209 391 aaKnown RBP18.2■□□□□ 0.5
SREBF1-218ENST00000578469 BPIFB4P59827 614 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 OSTNP61366 133 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 TRPC3Q13507 836 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 SMYD5Q6GMV2 418 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 TAF2Q6P1X5 1199 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 RUFY4Q6ZNE9 571 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 TRAPPC11Q7Z392 1133 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 CDR2LQ86X02 465 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-218ENST00000578469 SLC30A5Q8TAD4 765 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 DNAJB3Q8WWF6 145 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 MYLIPQ8WY64 445 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 DHX38Q92620 1227 aaKnown RBP18.2■□□□□ 0.5
SREBF1-218ENST00000578469 RNPC3Q96LT9 517 aaKnown RBP18.2■□□□□ 0.5
SREBF1-218ENST00000578469 XPNPEP3Q9NQH7 507 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 SEPT11Q9NVA2 429 aaKnown RBP18.2■□□□□ 0.5
SREBF1-218ENST00000578469 GINS2Q9Y248 185 aa18.2■□□□□ 0.5
SREBF1-218ENST00000578469 ANO9A1A5B4 782 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 MYADML2A6NDP7 307 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 FANCGO15287 622 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 RPLP2P05387 115 aaKnown RBP18.19■□□□□ 0.5
SREBF1-218ENST00000578469 KRT5P13647 590 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 DARSP14868 501 aaKnown RBP18.19■□□□□ 0.5
SREBF1-218ENST00000578469 AXLP30530 894 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 HOXC8P31273 242 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 TFAMQ00059 246 aaKnown RBP18.19■□□□□ 0.5
SREBF1-218ENST00000578469 TMEM62Q0P6H9 643 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 SGSM1Q2NKQ1 1148 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms