RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ATG16L1Q676U5 607 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 TRIM42Q8IWZ5 723 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 SLC5A5Q92911 643 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 SGSM3Q96HU1 749 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 TSC22D3Q99576 134 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 MXRA8Q9BRK3 442 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 KIAA1586Q9HCI6 787 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 SLIT1O75093 1534 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 FAM47DPA6NHR8 397 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 TARSP26639 723 aaKnown RBP12.72□□□□□ -0.37
ERBB2-206ENST00000578373 ARPP19P56211 112 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 RGS9BPQ6ZS82 235 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 SLC26A7Q8TE54 656 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 GJD4Q96KN9 370 aaPredicted RBP12.72□□□□□ -0.37
ERBB2-206ENST00000578373 NCAPGQ9BPX3 1015 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 TMEM51Q9NW97 253 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 STOML1Q9UBI4 398 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 JCADQ9P266 1359 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 BRD2P25440 801 aaKnown RBP12.72□□□□□ -0.37
ERBB2-206ENST00000578373 IL1RL1Q01638 556 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 ART3Q13508 389 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 MAP7Q14244 749 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 MEA1Q16626 185 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 HABP4Q5JVS0 413 aaKnown RBP12.72□□□□□ -0.37
ERBB2-206ENST00000578373 MIIPQ5JXC2 388 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 SLC35C1Q96A29 364 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 ARHGEF26Q96DR7 871 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 CRAMP1Q96RY5 1269 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 APOBEC2Q9Y235 224 aaKnown RBP12.72□□□□□ -0.37
ERBB2-206ENST00000578373 SIK3Q9Y2K2 1263 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 KCNN4O15554 427 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 ELF1P32519 619 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 GTF2H1P32780 548 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 CDK17Q00537 523 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 NME3Q13232 169 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 TTMPQ5BVD1 217 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 RABGAP1LQ5R372 815 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 CAPRIN2Q6IMN6 1127 aaKnown RBP12.71□□□□□ -0.37
ERBB2-206ENST00000578373 HHIPL2Q6UWX4 724 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 AENQ8WTP8 325 aaKnown RBP12.71□□□□□ -0.37
ERBB2-206ENST00000578373 TTC25Q96NG3 672 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 PCDHB2Q9Y5E7 798 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 LOC100653049A0A140TA62 436 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 KRT34O76011 436 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 RBP3P10745 1247 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 PDGFRAP16234 1089 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 PPATQ06203 517 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 LVRNQ6Q4G3 990 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 TRMT10CQ7L0Y3 403 aaKnown RBP12.71□□□□□ -0.37
ERBB2-206ENST00000578373 LCA5Q86VQ0 697 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 RNF135Q8IUD6 432 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 HACE1Q8IYU2 909 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 ATG4CQ96DT6 458 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 CDC42EP4Q9H3Q1 356 aaKnown RBP12.71□□□□□ -0.37
ERBB2-206ENST00000578373 NOD2Q9HC29 1040 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 ASNSD1Q9NWL6 643 aa12.71□□□□□ -0.37
ERBB2-206ENST00000578373 PLEKHG2Q9H7P9 1386 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 ATP9BO43861 1147 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 PIAS1O75925 651 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 GJB6O95452 261 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 KRT7P08729 469 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 RFX1P22670 979 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 SCTRP47872 440 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 ROR1Q01973 937 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 PRKCEQ02156 737 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 POU5F1BQ06416 359 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 KLHL38Q2WGJ6 581 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 SUPT20HL1Q3ZLR7 823 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 GPAT2Q6NUI2 795 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 CEP120Q8N960 986 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 C1orf131Q8NDD1 294 aaKnown RBP12.71□□□□□ -0.38
ERBB2-206ENST00000578373 KRT35Q92764 455 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 TAS2R14Q9NYV8 317 aa12.71□□□□□ -0.38
ERBB2-206ENST00000578373 NFIBO00712 420 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 CSDE1O75534 798 aaKnown RBP12.7□□□□□ -0.38
ERBB2-206ENST00000578373 TBXAS1P24557 533 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-206ENST00000578373 STAT5BP51692 787 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 NLRP11P59045 1033 aaKnown RBP12.7□□□□□ -0.38
ERBB2-206ENST00000578373 AP1B1Q10567 949 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.7□□□□□ -0.38
ERBB2-206ENST00000578373 TMEM259Q4ZIN3 620 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 ZNF720Q7Z2F6 126 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 LRP10Q7Z4F1 713 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 TTC13Q8NBP0 860 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 UBA3Q8TBC4 463 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.7□□□□□ -0.38
ERBB2-206ENST00000578373 TATDN2Q93075 761 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 SIK2Q9H0K1 926 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 CCDC68Q9H2F9 335 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 FAM49BQ9NUQ9 324 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 PCDHAC2Q9Y5I4 1007 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 CFAP73A6NFT4 308 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 ADAMTS3O15072 1205 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 UBOX5O94941 541 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 GGPS1O95749 300 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 TYK2P29597 1187 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 PGM1P36871 562 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 ZNF844Q08AG5 666 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 TMEM62Q0P6H9 643 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 KCNMA1Q12791 1236 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms