RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	ST18	O60284	1047 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TADA2A	O75478	443 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	B3GAT3	O94766	335 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TH	P07101	528 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	OR4Q2	P0C623	313 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SP9	P0CG40	484 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	GJA1	P17302	382 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	XBP1	P17861	261 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	LIG1	P18858	919 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MUT	P22033	750 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	FSHR	P23945	695 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	GUCY2C	P25092	1073 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	HOXA9	P31269	272 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	GBP2	P32456	591 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PRPH	P41219	470 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TRAPPC10	P48553	1259 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CDR1	P51861	262 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ZNF131	P52739	623 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	NUBP1	P53384	320 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	EPHA5	P54756	1037 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	OSTN	P61366	133 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MCL1	Q07820	350 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	KCNA1	Q09470	495 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	RAD51AP2	Q09MP3	1159 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ORC2	Q13416	577 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SNW1	Q13573	536 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PTPA	Q15257	358 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ENOX2	Q16206	610 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MAPK6	Q16659	721 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CCDC142	Q17RM4	750 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	FAM78A	Q5JUQ0	283 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	VARS2	Q5ST30	1063 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	STXBP5	Q5T5C0	1151 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TANGO2	Q6ICL3	276 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PHLDB3	Q6NSJ2	640 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	FAM173B	Q6P4H8	233 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	DCLRE1A	Q6PJP8	1040 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CYP26C1	Q6V0L0	522 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ZBTB33	Q86T24	672 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CEP57	Q86XR8	500 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TMC8	Q8IU68	726 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	DCLK2	Q8N568	766 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SYT2	Q8N9I0	419 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PJA1	Q8NG27	643 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SNX29	Q8TEQ0	813 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SPIRE2	Q8WWL2	714 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CLDN23	Q96B33	292 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TMX3	Q96JJ7	454 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SUSD3	Q96L08	255 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	FAM193B	Q96PV7	902 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TMEM134	Q9H6X4	195 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	AVEN	Q9NQS1	362 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ARHGEF3	Q9NR81	526 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	FBXL5	Q9UKA1	691 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SF3B1	O75533	1304 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PHLPP2	Q6ZVD8	1323 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MIA3	Q5JRA6	1907 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MYH11	P35749	1972 aa		4.89	□□□□□ -1.63
PPP4R1-209	ENST00000578329	OBSL1	O75147	1896 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TICRR	Q7Z2Z1	1910 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329		K7ERI5	159 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329		M0QZQ0	153 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PODXL	O00592	558 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	HCRT	O43612	131 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MARCH6	O60337	910 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PPP1R37	O75864	691 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SOAT2	O75908	522 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PIGR	P01833	764 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	RHO	P08100	348 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CXCL8	P10145	99 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MCF2	P10911	925 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CHRM1	P11229	460 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PLS3	P13797	630 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TARS	P26639	723 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ADSS	P30520	456 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	LRPAP1	P30533	357 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	HOXD13	P35453	343 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	EFNA5	P52803	228 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	NCKAP1L	P55160	1127 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	DMWD	Q09019	674 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	DCAF4L1	Q3SXM0	396 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ERICH6B	Q5W0A0	696 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TXNDC11	Q6PKC3	985 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MPZL3	Q6UWV2	235 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	VIT	Q6UXI7	678 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	RNF19B	Q6ZMZ0	732 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	GAREM2	Q75VX8	874 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TMEM150A	Q86TG1	271 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	LRRTM3	Q86VH5	581 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MAP4K3	Q8IVH8	894 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ZBTB8OS	Q8IWT0	167 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TCEAL8	Q8IYN2	117 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	GLIS3	Q8NEA6	775 aa		4.88	□□□□□ -1.63
PPP4R1-209	ENST00000578329	OR10T2	Q8NGX3	314 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms