RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 HVCN1Q96D96 273 aa25.03■■□□□ 1.6
VAPA-205ENST00000578314 TSPAN18Q96SJ8 248 aa25.03■■□□□ 1.6
VAPA-205ENST00000578314 WDR6Q9NNW5 1121 aaKnown RBP25.03■■□□□ 1.6
VAPA-205ENST00000578314 FBXW11Q9UKB1 542 aa25.03■■□□□ 1.6
VAPA-205ENST00000578314 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.03■■□□□ 1.6
VAPA-205ENST00000578314 STYXL1Q9Y6J8 313 aa25.03■■□□□ 1.6
VAPA-205ENST00000578314 MYH11P35749 1972 aa25.02■■□□□ 1.6
VAPA-205ENST00000578314 ANKRD63C9JTQ0 380 aa25.02■■□□□ 1.6
VAPA-205ENST00000578314 I3L4J1 428 aa25.02■■□□□ 1.6
VAPA-205ENST00000578314 ZMYND10O75800 440 aa25.02■■□□□ 1.6
VAPA-205ENST00000578314 PPP1R37O75864 691 aa25.02■■□□□ 1.6
VAPA-205ENST00000578314 TKTP29401 623 aaKnown RBP25.02■■□□□ 1.6
VAPA-205ENST00000578314 ENOX2Q16206 610 aaKnown RBP25.02■■□□□ 1.6
VAPA-205ENST00000578314 ZBTB41Q5SVQ8 909 aa25.02■■□□□ 1.6
VAPA-205ENST00000578314 ANKS3Q6ZW76 656 aa25.02■■□□□ 1.6
VAPA-205ENST00000578314 OTOP3Q7RTS5 596 aa25.02■■□□□ 1.6
VAPA-205ENST00000578314 MFSD14AQ96MC6 490 aa25.02■■□□□ 1.6
VAPA-205ENST00000578314 MSTO1Q9BUK6 570 aa25.02■■□□□ 1.6
VAPA-205ENST00000578314 PRKD2Q9BZL6 878 aa25.02■■□□□ 1.6
VAPA-205ENST00000578314 CPSF3Q9UKF6 684 aaKnown RBP25.02■■□□□ 1.6
VAPA-205ENST00000578314 FRMD3A2A2Y4 597 aa25.01■■□□□ 1.59
VAPA-205ENST00000578314 LACTBL1A8MY62 500 aa25.01■■□□□ 1.59
VAPA-205ENST00000578314 CUTAO60888 179 aa25.01■■□□□ 1.59
VAPA-205ENST00000578314 CYP3A5P20815 502 aa25.01■■□□□ 1.59
VAPA-205ENST00000578314 OR1D2P34982 312 aa25.01■■□□□ 1.59
VAPA-205ENST00000578314 ATL3Q6DD88 541 aa25.01■■□□□ 1.59
VAPA-205ENST00000578314 SLFN12LQ6IEE8 588 aa25.01■■□□□ 1.59
VAPA-205ENST00000578314 RSPO2Q6UXX9 243 aaPredicted RBP25.01■■□□□ 1.59
VAPA-205ENST00000578314 PDILTQ8N807 584 aa25.01■■□□□ 1.59
VAPA-205ENST00000578314 SMG7Q92540 1137 aaKnown RBP25.01■■□□□ 1.59
VAPA-205ENST00000578314 ACSF2Q96CM8 615 aaPredicted RBP25.01■■□□□ 1.59
VAPA-205ENST00000578314 RPF1Q9H9Y2 349 aaKnown RBP25.01■■□□□ 1.59
VAPA-205ENST00000578314 TUBGCP4Q9UGJ1 667 aa25.01■■□□□ 1.59
VAPA-205ENST00000578314 MUC6Q6W4X9 2439 aa25■■□□□ 1.59
VAPA-205ENST00000578314 SYN3O14994 580 aa25■■□□□ 1.59
VAPA-205ENST00000578314 LRPAP1P30533 357 aa25■■□□□ 1.59
VAPA-205ENST00000578314 PPP2R3AQ06190 1150 aa25■■□□□ 1.59
VAPA-205ENST00000578314 PKP1Q13835 747 aa25■■□□□ 1.59
VAPA-205ENST00000578314 BMP8AQ7Z5Y6 402 aa25■■□□□ 1.59
VAPA-205ENST00000578314 CD302Q8IX05 232 aa25■■□□□ 1.59
VAPA-205ENST00000578314 KIF12Q96FN5 646 aa25■■□□□ 1.59
VAPA-205ENST00000578314 MRPL44Q9H9J2 332 aaKnown RBP25■■□□□ 1.59
VAPA-205ENST00000578314 OLFML3Q9NRN5 406 aa25■■□□□ 1.59
VAPA-205ENST00000578314 LIMD1Q9UGP4 676 aa25■■□□□ 1.59
VAPA-205ENST00000578314 UBQLN1Q9UMX0 589 aaKnown RBP25■■□□□ 1.59
VAPA-205ENST00000578314 NUB1Q9Y5A7 615 aa25■■□□□ 1.59
VAPA-205ENST00000578314 TMEM221A6NGB7 291 aa24.99■■□□□ 1.59
VAPA-205ENST00000578314 M0R296 226 aa24.99■■□□□ 1.59
VAPA-205ENST00000578314 SPAG1Q07617 926 aa24.99■■□□□ 1.59
VAPA-205ENST00000578314 SIGLEC14Q08ET2 396 aa24.99■■□□□ 1.59
VAPA-205ENST00000578314 MRPL58Q14197 206 aaKnown RBP24.99■■□□□ 1.59
VAPA-205ENST00000578314 E2F4Q16254 413 aa24.99■■□□□ 1.59
VAPA-205ENST00000578314 AXDND1Q5T1B0 1012 aaPredicted RBP24.99■■□□□ 1.59
VAPA-205ENST00000578314 SPRYD3Q8NCJ5 442 aa24.99■■□□□ 1.59
VAPA-205ENST00000578314 SUSD3Q96L08 255 aa24.99■■□□□ 1.59
VAPA-205ENST00000578314 KCNH6Q9H252 994 aa24.99■■□□□ 1.59
VAPA-205ENST00000578314 CDY1Q9Y6F8 540 aa24.99■■□□□ 1.59
VAPA-205ENST00000578314 WDFY4Q6ZS81 3184 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 TISP43B9A030 160 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 TBC1D4O60343 1298 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 HNRNPA1P09651 372 aaKnown RBP eCLIP24.98■■□□□ 1.59
VAPA-205ENST00000578314 IDEP14735 1019 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 HOXA9P31269 272 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 HOXD11P31277 338 aaPredicted RBP24.98■■□□□ 1.59
VAPA-205ENST00000578314 POU5F1Q01860 360 aaKnown RBP24.98■■□□□ 1.59
VAPA-205ENST00000578314 UVSSAQ2YD98 709 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 VARS2Q5ST30 1063 aaKnown RBP24.98■■□□□ 1.59
VAPA-205ENST00000578314 ADALQ6DHV7 355 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 SLC8B1Q6J4K2 584 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 SHC4Q6S5L8 630 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 RTL10Q7L3V2 364 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 KCNG4Q8TDN1 519 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 STAMQ92783 540 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 LRRC27Q9C0I9 530 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 TNMDQ9H2S6 317 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 CUEDC2Q9H467 287 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 KBTBD4Q9NVX7 518 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 SORCS3Q9UPU3 1222 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 PCDHB13Q9Y5F0 798 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 ZNF318Q5VUA4 2279 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 TRIP11Q15643 1979 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 PLXNA3P51805 1871 aa24.98■■□□□ 1.59
VAPA-205ENST00000578314 CLUHO75153 1309 aa24.97■■□□□ 1.59
VAPA-205ENST00000578314 XPOTO43592 962 aaKnown RBP24.97■■□□□ 1.59
VAPA-205ENST00000578314 ADSSP30520 456 aa24.97■■□□□ 1.59
VAPA-205ENST00000578314 POSTNQ15063 836 aa24.97■■□□□ 1.59
VAPA-205ENST00000578314 FOXD4L6Q3SYB3 417 aaPredicted RBP24.97■■□□□ 1.59
VAPA-205ENST00000578314 L1TD1Q5T7N2 865 aaKnown RBP24.97■■□□□ 1.59
VAPA-205ENST00000578314 LIN9Q5TKA1 542 aa24.97■■□□□ 1.59
VAPA-205ENST00000578314 FOXD4L3Q6VB84 417 aaPredicted RBP24.97■■□□□ 1.59
VAPA-205ENST00000578314 UBALD2Q8IYN6 164 aa24.97■■□□□ 1.59
VAPA-205ENST00000578314 ACCSQ96QU6 501 aa24.97■■□□□ 1.59
VAPA-205ENST00000578314 IKZF4Q9H2S9 585 aa24.97■■□□□ 1.59
VAPA-205ENST00000578314 PIDD1Q9HB75 910 aa24.97■■□□□ 1.59
VAPA-205ENST00000578314 PANK4Q9NVE7 773 aa24.97■■□□□ 1.59
VAPA-205ENST00000578314 TBC1D7Q9P0N9 293 aa24.97■■□□□ 1.59
VAPA-205ENST00000578314 AGO2Q9UKV8 859 aaKnown RBP24.97■■□□□ 1.59
VAPA-205ENST00000578314 EXOC7Q9UPT5 735 aa24.97■■□□□ 1.59
VAPA-205ENST00000578314 N4BP1O75113 896 aaKnown RBP24.96■■□□□ 1.59
VAPA-205ENST00000578314 C8AP07357 584 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms