RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 PGM5Q15124 567 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 PPP2R5AQ15172 486 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 NBPF20Q3BBV1 942 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 FAM71AQ8IYT1 594 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 LRRC71Q8N4P6 559 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 TLCD1Q96CP7 247 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 TAOK3Q9H2K8 898 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.76■□□□□ 0.11
PRPF8-216ENST00000577001 DNPEPQ9ULA0 475 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 NAALADL1Q9UQQ1 740 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 GINS2Q9Y248 185 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 A0A1W2PPM1 405 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 CTNNA2P26232 953 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 ZNF131P52739 623 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 GPS1Q13098 491 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 TRPM8Q7Z2W7 1104 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 KLHL29Q96CT2 875 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 RANBP17Q9H2T7 1088 aaKnown RBP15.76■□□□□ 0.11
PRPF8-216ENST00000577001 TMEM206Q9H813 350 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 SLC24A3Q9HC58 644 aa15.76■□□□□ 0.11
PRPF8-216ENST00000577001 ZNF831Q5JPB2 1677 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 MROH7Q68CQ1 1323 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 GTPBP10A4D1E9 387 aaKnown RBP15.75■□□□□ 0.11
PRPF8-216ENST00000577001 BTNL10A8MVZ5 291 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 CPP00450 1065 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 CDR2Q01850 454 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 SIX1Q15475 284 aaPredicted RBP15.75■□□□□ 0.11
PRPF8-216ENST00000577001 FAXCQ5TGI0 409 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 TRAPPC12Q8WVT3 735 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 MCEEQ96PE7 176 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 ZNF317Q96PQ6 595 aaPredicted RBP15.75■□□□□ 0.11
PRPF8-216ENST00000577001 EHMT1Q9H9B1 1298 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 FBXO40Q9UH90 709 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 MRPL42Q9Y6G3 142 aaKnown RBP15.75■□□□□ 0.11
PRPF8-216ENST00000577001 NHSQ6T4R5 1651 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 CST3P01034 146 aaPredicted RBP15.75■□□□□ 0.11
PRPF8-216ENST00000577001 TARSP26639 723 aaKnown RBP15.75■□□□□ 0.11
PRPF8-216ENST00000577001 IRX4P78413 519 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 ELF3P78545 371 aaPredicted RBP15.75■□□□□ 0.11
PRPF8-216ENST00000577001 SGSM1Q2NKQ1 1148 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 MDH1BQ5I0G3 518 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 DCUN1D2Q6PH85 259 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 ZBED8Q8IZ13 594 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 CEP120Q8N960 986 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 C1orf131Q8NDD1 294 aaKnown RBP15.75■□□□□ 0.11
PRPF8-216ENST00000577001 MKNK1Q9BUB5 465 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 NOD2Q9HC29 1040 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 NINJ2Q9NZG7 142 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 NR2E3Q9Y5X4 410 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 ZNF541Q9H0D2 1346 aa15.75■□□□□ 0.11
PRPF8-216ENST00000577001 E2F8A0AVK6 867 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 SGK1O00141 431 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 POLGP54098 1239 aaPredicted RBP15.74■□□□□ 0.11
PRPF8-216ENST00000577001 CDH8P55286 799 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 TFAMQ00059 246 aaKnown RBP15.74■□□□□ 0.11
PRPF8-216ENST00000577001 RAB6CQ53S08 254 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 RSBN1LQ6PCB5 846 aaPredicted RBP15.74■□□□□ 0.11
PRPF8-216ENST00000577001 RBM15Q96T37 977 aaKnown RBP eCLIP15.74■□□□□ 0.118e-7■■■□□ 16.9
PRPF8-216ENST00000577001 RAB6CQ9H0N0 254 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 APOBEC3GQ9HC16 384 aaKnown RBP15.74■□□□□ 0.11
PRPF8-216ENST00000577001 EDN1P05305 212 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 F7P08709 466 aaPredicted RBP15.74■□□□□ 0.11
PRPF8-216ENST00000577001 IGBP1P78318 339 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 PKN2Q16513 984 aaKnown RBP15.74■□□□□ 0.11
PRPF8-216ENST00000577001 CDO1Q16878 200 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 WDR44Q5JSH3 913 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 C6orf118Q5T5N4 469 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 VSTM1Q6UX27 236 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 PDCD2LQ9BRP1 358 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 PIH1D1Q9NWS0 290 aaKnown RBP15.74■□□□□ 0.11
PRPF8-216ENST00000577001 MAGED2Q9UNF1 606 aaPredicted RBP15.74■□□□□ 0.11
PRPF8-216ENST00000577001 DIAPH2O60879 1101 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 RASSF9O75901 435 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 NR3C2P08235 984 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 KRT16P08779 473 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 GNA15P30679 374 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 FOXN2P32314 431 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 ALDH5A1P51649 535 aaPredicted RBP15.74■□□□□ 0.11
PRPF8-216ENST00000577001 CLNS1AP54105 237 aaKnown RBP15.74■□□□□ 0.11
PRPF8-216ENST00000577001 DHX34Q14147 1143 aaKnown RBP15.74■□□□□ 0.11
PRPF8-216ENST00000577001 TDRD10Q5VZ19 366 aaKnown RBP15.74■□□□□ 0.11
PRPF8-216ENST00000577001 ACAD10Q6JQN1 1059 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 MFSD7Q6UXD7 560 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 BTNL9Q6UXG8 535 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.74■□□□□ 0.11
PRPF8-216ENST00000577001 FAM151AQ8WW52 585 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 TRIM56Q9BRZ2 755 aaKnown RBP15.74■□□□□ 0.11
PRPF8-216ENST00000577001 PCDHA3Q9Y5H8 950 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 IVNS1ABPQ9Y6Y0 642 aa15.74■□□□□ 0.11
PRPF8-216ENST00000577001 KLRG2A4D1S0 409 aaPredicted RBP15.73■□□□□ 0.11
PRPF8-216ENST00000577001 FAM187AA6NFU0 413 aa15.73■□□□□ 0.11
PRPF8-216ENST00000577001 KRT1P04264 644 aa15.73■□□□□ 0.11
PRPF8-216ENST00000577001 SSTR1P30872 391 aa15.73■□□□□ 0.11
PRPF8-216ENST00000577001 MMP13P45452 471 aa15.73■□□□□ 0.11
PRPF8-216ENST00000577001 PRKCEQ02156 737 aa15.73■□□□□ 0.11
PRPF8-216ENST00000577001 CXCL9Q07325 125 aa15.73■□□□□ 0.11
PRPF8-216ENST00000577001 TAF5Q15542 800 aa15.73■□□□□ 0.11
PRPF8-216ENST00000577001 DEFB132Q7Z7B7 95 aa15.73■□□□□ 0.11
PRPF8-216ENST00000577001 MCOLN2Q8IZK6 566 aa15.73■□□□□ 0.11
PRPF8-216ENST00000577001 FITM2Q8N6M3 262 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms