RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CCDC43Q96MW1 224 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 TTC12Q9H892 705 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 CYP4F11Q9HBI6 524 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 AVENQ9NQS1 362 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 ARHGEF37A1IGU5 675 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 PRRG1O14668 218 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 N4BP3O15049 544 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 MOSPD3O75425 235 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 XRCC6P12956 609 aaKnown RBP eCLIP11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 PSMC3P17980 439 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 ATP2B1P20020 1258 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 CCR3P51677 355 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 SCRN1Q12765 414 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 NR5A1Q13285 461 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 PPP2R5DQ14738 602 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 CSRP2Q16527 193 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 UPP1Q16831 310 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 CDCA2Q69YH5 1023 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 HEATR6Q6AI08 1181 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 CPLX2Q6PUV4 134 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 ANKS3Q6ZW76 656 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 GPIHBP1Q8IV16 184 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 ZBTB8OSQ8IWT0 167 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 FAM177A1Q8N128 213 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 ASB16Q96NS5 453 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 PPP1R10Q96QC0 940 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 NAP1L4Q99733 375 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 RBM12Q9NTZ6 932 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 C2orf42Q9NWW7 574 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 PIAS3Q9Y6X2 628 aa11.15□□□□□ -0.62
NPLOC4-220ENST00000576940 SDK1Q7Z5N4 2213 aa11.15□□□□□ -0.63
NPLOC4-220ENST00000576940 CHD6Q8TD26 2715 aa11.15□□□□□ -0.63
NPLOC4-220ENST00000576940 USP24Q9UPU5 2620 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 TMEM189-UBE2V1I3L0A0 370 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 ACKR2O00590 384 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 WNT7AO00755 349 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 ZNF197O14709 1029 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 PRKCBP05771 671 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 SPATA31C1P0DKV0 1188 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 ATF2P15336 505 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 SOX4Q06945 474 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 CALCRLQ16602 461 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 MAPK6Q16659 721 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 N4BP2L1Q5TBK1 243 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 CYP4A22Q5TCH4 519 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 SLC8B1Q6J4K2 584 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 PDZD4Q76G19 769 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 SMARCD2Q92925 531 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 ADPGKQ9BRR6 497 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 TRPV5Q9NQA5 729 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 CYP46A1Q9Y6A2 500 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 RALGAPA1Q6GYQ0 2036 aa11.14□□□□□ -0.63
NPLOC4-220ENST00000576940 NCANO14594 1321 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 SMIM28A0A1B0GU29 152 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 K7ESF4 209 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 ZNF263O14978 683 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 AXIN1O15169 862 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 TRAPPC3O43617 180 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 LRP3O75074 770 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 MICAL2O94851 1124 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 MYL4P12829 197 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 XBP1P17861 261 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 SOX9P48436 509 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 RBM25P49756 843 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 CCDC6Q16204 474 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 WDR44Q5JSH3 913 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 NT5DC1Q5TFE4 455 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 CATSPER3Q86XQ3 398 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 TCEAL8Q8IYN2 117 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 SPEM1Q8N4L4 309 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 TTC8Q8TAM2 541 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 ZSCAN18Q8TBC5 510 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 RSPRY1Q96DX4 576 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 ZNF512Q96ME7 567 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 KIFC3Q9BVG8 833 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 CCDC113Q9H0I3 377 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 C2orf40Q9H1Z8 148 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 RXFP3Q9NSD7 469 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 CEP72Q9P209 647 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 INSL5Q9Y5Q6 135 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 TRIP11Q15643 1979 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 ASPMQ8IZT6 3477 aa11.13□□□□□ -0.63
NPLOC4-220ENST00000576940 CNOT1A5YKK6 2376 aaKnown RBP11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 TICRRQ7Z2Z1 1910 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 HEPACAM2A8MVW5 462 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 ARNTLO00327 626 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 MED24O75448 989 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 CTDNEP1O95476 244 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 OSTNP61366 133 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 TWF1Q12792 350 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 PTGDRQ13258 359 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 MRPL58Q14197 206 aaKnown RBP11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 TEAD2Q15562 447 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 IL31Q6EBC2 164 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 IQCEQ6IPM2 695 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 PADI6Q6TGC4 694 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 Q6ZS52 159 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 LONP2Q86WA8 852 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms