RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 PIDD1Q9HB75 910 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 HCFC1R1Q9NWW0 138 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 MTRRQ9UBK8 725 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 NOTCH4Q99466 2003 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 ANK1P16157 1881 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 TTC26A0AVF1 554 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 LACTBL1A8MY62 500 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 SLC26A4O43511 780 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 TBCAO75347 108 aaKnown RBP12.97□□□□□ -0.33
LITAF-219ENST00000576334 C8AP07357 584 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 ARPP19P56211 112 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 ELAVL2Q12926 359 aaKnown RBP12.97□□□□□ -0.33
LITAF-219ENST00000576334 PKP1Q13835 747 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 SLC39A14Q15043 492 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 VARS2Q5ST30 1063 aaKnown RBP12.97□□□□□ -0.33
LITAF-219ENST00000576334 AXDND1Q5T1B0 1012 aaPredicted RBP12.97□□□□□ -0.33
LITAF-219ENST00000576334 OTOP3Q7RTS5 596 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 BMP8AQ7Z5Y6 402 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 GPR65Q8IYL9 337 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 FBXL6Q8N531 539 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 PDILTQ8N807 584 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 ZSWIM2Q8NEG5 633 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 PRSS33Q8NF86 280 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 SLC7A14Q8TBB6 771 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 ACSF2Q96CM8 615 aaPredicted RBP12.97□□□□□ -0.33
LITAF-219ENST00000576334 DNAJC19Q96DA6 116 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 FAM212AQ96EL1 285 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 KIF12Q96FN5 646 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 MFSD14AQ96MC6 490 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 PHOX2BQ99453 314 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 FGFBP2Q9BYJ0 223 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 POLIQ9UNA4 740 aa12.97□□□□□ -0.33
LITAF-219ENST00000576334 TIMM13Q9Y5L4 95 aaPredicted RBP12.97□□□□□ -0.33
LITAF-219ENST00000576334 A0A0B4J269 797 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 PIGRP01833 764 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 CLTAP09496 248 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 ACOT2P49753 483 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 CDR1P51861 262 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 GTF2BQ00403 316 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 ROR1Q01973 937 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 CREMQ03060 361 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 RAB33AQ14088 237 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 PPM1LQ5SGD2 360 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 RRAGBQ5VZM2 374 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 POTEHQ6S545 545 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 HDAC7Q8WUI4 952 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 DDX12PQ92771 950 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 FAM84AQ96KN4 292 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 MSTO1Q9BUK6 570 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 RPP25Q9BUL9 199 aaKnown RBP12.96□□□□□ -0.33
LITAF-219ENST00000576334 SLC38A7Q9NVC3 462 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 ZDHHC7Q9NXF8 308 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 NUB1Q9Y5A7 615 aa12.96□□□□□ -0.33
LITAF-219ENST00000576334 MYO15AQ9UKN7 3530 aa12.96□□□□□ -0.34
LITAF-219ENST00000576334 COL4A3Q01955 1670 aa12.96□□□□□ -0.34
LITAF-219ENST00000576334 WDR27A2RRH5 827 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 NRG2O14511 850 aaPredicted RBP12.95□□□□□ -0.34
LITAF-219ENST00000576334 OGTO15294 1046 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 TBC1D4O60343 1298 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 PAPLNO95428 1278 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 SEC24AO95486 1093 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 NFICP08651 508 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 MCM4P33991 863 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 NASPP49321 788 aaPredicted RBP12.95□□□□□ -0.34
LITAF-219ENST00000576334 CASP5P51878 434 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 ZBTB6Q15916 424 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 LIN9Q5TKA1 542 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 SCARA3Q6AZY7 606 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 JADE1Q6IE81 842 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 ANKS3Q6ZW76 656 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 ZNF720Q7Z2F6 126 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 MAP4K3Q8IVH8 894 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 KRI1Q8N9T8 703 aaKnown RBP12.95□□□□□ -0.34
LITAF-219ENST00000576334 LINC00301Q8NCQ3 95 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 GLIS3Q8NEA6 775 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 ITFG1Q8TB96 612 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 HPS3Q969F9 1004 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 SNX21Q969T3 373 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 CHAMP1Q96JM3 812 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 CCDC39Q9UFE4 941 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 DPP7Q9UHL4 492 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 KCNG1Q9UIX4 513 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 BACE2Q9Y5Z0 518 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 USP34Q70CQ2 3546 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 DMDP11532 3685 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 VPS13AQ96RL7 3174 aa12.95□□□□□ -0.34
LITAF-219ENST00000576334 H0YCG3 227 aa12.94□□□□□ -0.34
LITAF-219ENST00000576334 TULP1O00294 542 aaPredicted RBP12.94□□□□□ -0.34
LITAF-219ENST00000576334 TRAPPC3O43617 180 aa12.94□□□□□ -0.34
LITAF-219ENST00000576334 PPP1R37O75864 691 aa12.94□□□□□ -0.34
LITAF-219ENST00000576334 OR4Q2P0C623 313 aa12.94□□□□□ -0.34
LITAF-219ENST00000576334 FSHRP23945 695 aa12.94□□□□□ -0.34
LITAF-219ENST00000576334 AVPR2P30518 371 aa12.94□□□□□ -0.34
LITAF-219ENST00000576334 ADSSP30520 456 aa12.94□□□□□ -0.34
LITAF-219ENST00000576334 RPL9P32969 192 aaKnown RBP12.94□□□□□ -0.34
LITAF-219ENST00000576334 WNT7BP56706 349 aa12.94□□□□□ -0.34
LITAF-219ENST00000576334 TDGQ13569 410 aa12.94□□□□□ -0.34
LITAF-219ENST00000576334 MRPL58Q14197 206 aaKnown RBP12.94□□□□□ -0.34
LITAF-219ENST00000576334 STK38Q15208 465 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms