RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 PCMTD2Q9NV79 361 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 TBX10O75333 385 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 HSPA6P17066 643 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 MAGEA4P43358 317 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 ATP13A4Q4VNC1 1196 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 KIFAP3Q92845 792 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 CADM1Q9BY67 442 aaKnown RBP15.43■□□□□ 0.06
SCARF1-209ENST00000576012 TMEM117Q9H0C3 514 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 LRRC4BQ9NT99 713 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.43■□□□□ 0.06
SCARF1-209ENST00000576012 HEY2Q9UBP5 337 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 ZMYM2Q9UBW7 1377 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 RTN3O95197 1032 aaPredicted RBP15.43■□□□□ 0.06
SCARF1-209ENST00000576012 ALAS1P13196 640 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 ATF7P17544 494 aaPredicted RBP15.43■□□□□ 0.06
SCARF1-209ENST00000576012 KRT4P19013 534 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 CLK2P49760 499 aaKnown RBP15.43■□□□□ 0.06
SCARF1-209ENST00000576012 SPIRE1Q08AE8 756 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 HYIQ5T013 277 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 PCNX4Q63HM2 1172 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.43■□□□□ 0.06
SCARF1-209ENST00000576012 BORCS6Q96GS4 357 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 CLPTM1LQ96KA5 538 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 SYT11Q9BT88 431 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 KIAA1586Q9HCI6 787 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 STOML1Q9UBI4 398 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 USP21Q9UK80 565 aa15.43■□□□□ 0.06
SCARF1-209ENST00000576012 C6orf229H3BNL8 230 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 K7ENM7 598 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 SLC16A3O15427 465 aaKnown RBP15.42■□□□□ 0.06
SCARF1-209ENST00000576012 CFBP00751 764 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 ITIH2P19823 946 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 GTF2IP78347 998 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 LRRC6Q86X45 466 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 SLFN12Q8IYM2 578 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 ZBED8Q8IZ13 594 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 DDX4Q9NQI0 724 aaKnown RBP15.42■□□□□ 0.06
SCARF1-209ENST00000576012 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.42■□□□□ 0.06
SCARF1-209ENST00000576012 TMEM150BA6NC51 233 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 USP1O94782 785 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 MAPK6Q16659 721 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 ZNF333Q96JL9 665 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 FHDC1Q9C0D6 1143 aaPredicted RBP15.42■□□□□ 0.06
SCARF1-209ENST00000576012 TOPORSQ9NS56 1045 aaPredicted RBP15.42■□□□□ 0.06
SCARF1-209ENST00000576012 WDR35Q9P2L0 1181 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 DCTN3O75935 186 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 CNGA1P29973 690 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 HSPA1LP34931 641 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 PPP2R5CQ13362 524 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 CFAP157Q5JU67 520 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 C4orf50Q6ZRC1 276 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 GALNT15Q8N3T1 639 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 EZH1Q92800 747 aaPredicted RBP15.42■□□□□ 0.06
SCARF1-209ENST00000576012 DCLRE1BQ9H816 532 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 ZNF148Q9UQR1 794 aa15.42■□□□□ 0.06
SCARF1-209ENST00000576012 LIN7AO14910 233 aaPredicted RBP15.41■□□□□ 0.06
SCARF1-209ENST00000576012 RNF8O76064 485 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 ASMTLO95671 621 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 IVDP26440 423 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 SERPINB3P29508 390 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 VHLP40337 213 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 TRAF1Q13077 416 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 C11orf63Q6NUN7 778 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 HIPK4Q8NE63 616 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 ETNPPLQ8TBG4 499 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 EPS8L1Q8TE68 723 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 FAM161BQ96MY7 647 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 TRAIPQ9BWF2 469 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 MEIS2O14770 477 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 SKIP12755 728 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 AMPD1P23109 780 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 RHBDL3P58872 404 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 LMBRD2Q68DH5 695 aaPredicted RBP15.41■□□□□ 0.06
SCARF1-209ENST00000576012 MFN1Q8IWA4 741 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 JDP2Q8WYK2 163 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 UBE2OQ9C0C9 1292 aaKnown RBP15.41■□□□□ 0.06
SCARF1-209ENST00000576012 WHRNQ9P202 907 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 SERPINA10Q9UK55 444 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 NRAPQ86VF7 1730 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 KITP10721 976 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 YARSP54577 528 aaKnown RBP15.41■□□□□ 0.06
SCARF1-209ENST00000576012 GAD2Q05329 585 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 MKRN3Q13064 507 aaKnown RBP15.41■□□□□ 0.06
SCARF1-209ENST00000576012 PARP6Q2NL67 630 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 PPP1R18Q6NYC8 613 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 FOXR2Q6PJQ5 311 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 LRRC74BQ6ZQY2 392 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 CLNKQ7Z7G1 428 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 KBTBD2Q8IY47 623 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 PPFIBP2Q8ND30 876 aa15.41■□□□□ 0.06
SCARF1-209ENST00000576012 ZNF75CPQ92670 426 aaPredicted RBP15.41■□□□□ 0.06
SCARF1-209ENST00000576012 ZNF219Q9P2Y4 722 aaPredicted RBP15.41■□□□□ 0.06
SCARF1-209ENST00000576012 EDF1O60869 148 aaKnown RBP15.4■□□□□ 0.06
SCARF1-209ENST00000576012 PTPN4P29074 926 aa15.4■□□□□ 0.06
SCARF1-209ENST00000576012 CETN1Q12798 172 aa15.4■□□□□ 0.06
SCARF1-209ENST00000576012 KIF22Q14807 665 aa15.4■□□□□ 0.06
SCARF1-209ENST00000576012 ARMCX6Q7L4S7 300 aa15.4■□□□□ 0.06
SCARF1-209ENST00000576012 MAK16Q9BXY0 300 aaKnown RBP15.4■□□□□ 0.06
SCARF1-209ENST00000576012 WRAP73Q9P2S5 460 aaPredicted RBP15.4■□□□□ 0.06
SCARF1-209ENST00000576012 MARCOQ9UEW3 520 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms