RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 NENFQ9UMX5 172 aa9.08□□□□□ -0.96
RPAIN-215ENST00000575112 NUMBLQ9Y6R0 609 aa9.08□□□□□ -0.96
RPAIN-215ENST00000575112 IGKV6D-41A0A0C4DH26 115 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 WDR64B1ANS9 1081 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 PTGIRP43119 386 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 CLK2P49760 499 aaKnown RBP9.07□□□□□ -0.96
RPAIN-215ENST00000575112 JAM2P57087 298 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 VSTM1Q6UX27 236 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 INTS8Q75QN2 995 aaKnown RBP9.07□□□□□ -0.96
RPAIN-215ENST00000575112 RHPN2Q8IUC4 686 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 SLC5A4Q9NY91 659 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 EXOC7Q9UPT5 735 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 DDX60LQ5H9U9 1706 aaKnown RBP9.07□□□□□ -0.96
RPAIN-215ENST00000575112 SPDYE5A6NIY4 337 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 ENTPD3O75355 529 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 PSMD10O75832 226 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 RRM1P23921 792 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 NOP9Q86U38 636 aaKnown RBP9.07□□□□□ -0.96
RPAIN-215ENST00000575112 SRRM1Q8IYB3 904 aaKnown RBP9.07□□□□□ -0.96
RPAIN-215ENST00000575112 SLCO1B3Q9NPD5 702 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 AAASQ9NRG9 546 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 GGA3Q9NZ52 723 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 SAMD15Q9P1V8 674 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 SUCLA2Q9P2R7 463 aaPredicted RBP9.07□□□□□ -0.96
RPAIN-215ENST00000575112 SUGT1Q9Y2Z0 365 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 A0A1B0GUA9 196 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 RIPK2O43353 540 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 LINGO3P0C6S8 592 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 SLC8A1P32418 973 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 IRX4P78413 519 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 MAPK7Q13164 816 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 ANKRD20A2Q5SQ80 823 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 ANKRD20A1Q5TYW2 823 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 ANKRD20A3Q5VUR7 823 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 PPP1R21Q6ZMI0 780 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 FAM160B2Q86V87 743 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 SPDYE1Q8NFV5 336 aaPredicted RBP9.07□□□□□ -0.96
RPAIN-215ENST00000575112 SEMA4DQ92854 862 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 GMCL1Q96IK5 515 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 CALR3Q96L12 384 aaKnown RBP9.07□□□□□ -0.96
RPAIN-215ENST00000575112 IDI2Q9BXS1 227 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 CALN1Q9BXU9 219 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 EDEM3Q9BZQ6 932 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 RAB17Q9H0T7 212 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 C12orf65Q9H3J6 166 aaKnown RBP9.07□□□□□ -0.96
RPAIN-215ENST00000575112 PCDHA3Q9Y5H8 950 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 PCDHA10Q9Y5I2 948 aa9.07□□□□□ -0.96
RPAIN-215ENST00000575112 BPTFQ12830 3046 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 CLGNO14967 610 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 CETN2P41208 172 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 PSMC5P62195 406 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 PRKCEQ02156 737 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 MTMR3Q13615 1198 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 TMED2Q15363 201 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 ZBTB41Q5SVQ8 909 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 SV2AQ7L0J3 742 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 ANKMY2Q8IV38 441 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 ANKS4BQ8N8V4 417 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 NETO2Q8NC67 525 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 RNF217Q8TC41 542 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 RSRC1Q96IZ7 334 aaKnown RBP9.06□□□□□ -0.96
RPAIN-215ENST00000575112 FAM49AQ9H0Q0 323 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-215ENST00000575112 TMEM206Q9H813 350 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 FBXO40Q9UH90 709 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 DOT1LQ8TEK3 1739 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 PITPNM2Q9BZ72 1349 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 O00370 1275 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 TARSP26639 723 aaKnown RBP9.06□□□□□ -0.96
RPAIN-215ENST00000575112 SATB1Q01826 763 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 SPIRE1Q08AE8 756 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 ZNF268Q14587 947 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-215ENST00000575112 KRT39Q6A163 491 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 PAF1Q8N7H5 531 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 SLITRK6Q9H5Y7 841 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 A0A1B0GVG6 124 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 CCDC188H7C350 402 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 SGK1O00141 431 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 RASGRF2O14827 1237 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 PLS3P13797 630 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 BAG6P46379 1132 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 MRPS9P82933 396 aaKnown RBP9.06□□□□□ -0.96
RPAIN-215ENST00000575112 HOOK3Q86VS8 718 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 CTAGE3PQ8IX95 158 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 RTKN2Q8IZC4 609 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 PHC3Q8NDX5 983 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 FBXL13Q8NEE6 735 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 TTC8Q8TAM2 541 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 HSPH1Q92598 858 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 SLC5A5Q92911 643 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 ARHGEF2Q92974 986 aaKnown RBP9.06□□□□□ -0.96
RPAIN-215ENST00000575112 IQCDQ96DY2 449 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 PCDHB18PQ96TA0 734 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 POLR3CQ9BUI4 534 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-215ENST00000575112 CDC42EP4Q9H3Q1 356 aaKnown RBP9.06□□□□□ -0.96
RPAIN-215ENST00000575112 ELP3Q9H9T3 547 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 TUFT1Q9NNX1 390 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 FAM114A2Q9NRY5 505 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 RAB20Q9NX57 234 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 TRAF3IP3Q9Y228 551 aa9.06□□□□□ -0.96
RPAIN-215ENST00000575112 KAT6AQ92794 2004 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms