RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 ING5Q8WYH8 240 aa16.65■□□□□ 0.26
CTNS-209ENST00000574776 TIPINQ9BVW5 301 aa16.65■□□□□ 0.26
CTNS-209ENST00000574776 KIF3AQ9Y496 699 aa16.65■□□□□ 0.26
CTNS-209ENST00000574776 NUB1Q9Y5A7 615 aa16.65■□□□□ 0.26
CTNS-209ENST00000574776 NPHP3-ACAD11A0A0J9YXS1 232 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 VWA3AA6NCI4 1184 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 ABLIM3O94929 683 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 PLS3P13797 630 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 ELF1P32519 619 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 RPL9P32969 192 aaKnown RBP16.64■□□□□ 0.25
CTNS-209ENST00000574776 SMTNP53814 917 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 STARD6P59095 220 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 ROR1Q01973 937 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 RABEP1Q15276 862 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 SLC10A6Q3KNW5 377 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 SLC44A4Q53GD3 710 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 HYIQ5T013 277 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 SLC8B1Q6J4K2 584 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 NPAS3Q8IXF0 933 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 TMEM161BQ8NDZ6 487 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 MCRS1Q96EZ8 462 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 TMX3Q96JJ7 454 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 KXD1Q9BQD3 176 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 FOXQ1Q9C009 403 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 DLGAP2Q9P1A6 1054 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 CNTN3Q9P232 1028 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 ANKFY1Q9P2R3 1169 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 KCNG1Q9UIX4 513 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 KCNH3Q9ULD8 1083 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 MRPS23Q9Y3D9 190 aaKnown RBP16.64■□□□□ 0.25
CTNS-209ENST00000574776 WDR87Q6ZQQ6 2873 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 MYH15Q9Y2K3 1946 aa16.64■□□□□ 0.25
CTNS-209ENST00000574776 CITO14578 2027 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 WDR27A2RRH5 827 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 H3BQV1 296 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 H7C4K7 107 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 PRRG1O14668 218 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 SYN3O14994 580 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 TBC1D4O60343 1298 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 LRRN2O75325 713 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 TOM1L1O75674 476 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 RHOP08100 348 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 PLA2G4BP0C869 781 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 MAPTP10636 758 aaKnown RBP16.63■□□□□ 0.25
CTNS-209ENST00000574776 PTPN2P17706 415 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 GJB2P29033 226 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 SLC12A3P55017 1021 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 CACNB1Q02641 598 aaPredicted RBP16.63■□□□□ 0.25
CTNS-209ENST00000574776 MRPL58Q14197 206 aaKnown RBP16.63■□□□□ 0.25
CTNS-209ENST00000574776 POTEHQ6S545 545 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 ADSSL1Q8N142 457 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 SHDQ96IW2 340 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 FBXL5Q9UKA1 691 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 MYH11P35749 1972 aa16.63■□□□□ 0.25
CTNS-209ENST00000574776 ARHGEF37A1IGU5 675 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 CLDN3O15551 220 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 SEC24AO95486 1093 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 LRG1P02750 347 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 GLULP15104 373 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 ATF2P15336 505 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 MATR3P43243 847 aaKnown RBP eCLIP16.62■□□□□ 0.25
CTNS-209ENST00000574776 SPAG1Q07617 926 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 NOLC1Q14978 699 aaKnown RBP eCLIP16.62■□□□□ 0.25
CTNS-209ENST00000574776 SLC5A9Q2M3M2 681 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 CTXN3Q4LDR2 81 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 ARSHQ5FYA8 562 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 ZPBP2Q6X784 338 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 TMEM130Q8N3G9 435 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 KCTD17Q8N5Z5 321 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 PJA1Q8NG27 643 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 KCNG4Q8TDN1 519 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 CDK5RAP3Q96JB5 506 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 TBC1D32Q96NH3 1257 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 PLA2G2FQ9BZM2 168 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 CYP4F11Q9HBI6 524 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 R4GN57 208 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 CACNA1IQ9P0X4 2223 aa16.62■□□□□ 0.25
CTNS-209ENST00000574776 KANSL1LA0AUZ9 987 aa16.61■□□□□ 0.25
CTNS-209ENST00000574776 CD2BP2O95400 341 aaKnown RBP16.61■□□□□ 0.25
CTNS-209ENST00000574776 MCM4P33991 863 aa16.61■□□□□ 0.25
CTNS-209ENST00000574776 MLF2Q15773 248 aaPredicted RBP16.61■□□□□ 0.25
CTNS-209ENST00000574776 C1orf210Q8IVY1 113 aa16.61■□□□□ 0.25
CTNS-209ENST00000574776 TCEAL8Q8IYN2 117 aa16.61■□□□□ 0.25
CTNS-209ENST00000574776 SUSD3Q96L08 255 aa16.61■□□□□ 0.25
CTNS-209ENST00000574776 CORO1BQ9BR76 489 aa16.61■□□□□ 0.25
CTNS-209ENST00000574776 HAPLN2Q9GZV7 340 aa16.61■□□□□ 0.25
CTNS-209ENST00000574776 GDE1Q9NZC3 331 aa16.61■□□□□ 0.25
CTNS-209ENST00000574776 TUBGCP4Q9UGJ1 667 aa16.61■□□□□ 0.25
CTNS-209ENST00000574776 MTF2Q9Y483 593 aaPredicted RBP16.61■□□□□ 0.25
CTNS-209ENST00000574776 EP300Q09472 2414 aaPredicted RBP16.61■□□□□ 0.25
CTNS-209ENST00000574776 CXCL8P10145 99 aa16.6■□□□□ 0.25
CTNS-209ENST00000574776 CEBPBP17676 345 aa16.6■□□□□ 0.25
CTNS-209ENST00000574776 CD72P21854 359 aa16.6■□□□□ 0.25
CTNS-209ENST00000574776 MARCKSP29966 332 aaPredicted RBP16.6■□□□□ 0.25
CTNS-209ENST00000574776 PRKCQQ04759 706 aa16.6■□□□□ 0.25
CTNS-209ENST00000574776 MCL1Q07820 350 aa16.6■□□□□ 0.25
CTNS-209ENST00000574776 TMEM119Q4V9L6 283 aa16.6■□□□□ 0.25
CTNS-209ENST00000574776 ARL6IP4Q66PJ3 421 aaKnown RBP16.6■□□□□ 0.25
CTNS-209ENST00000574776 TPGS2Q68CL5 300 aa16.6■□□□□ 0.25
CTNS-209ENST00000574776 TANGO2Q6ICL3 276 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms