RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 ZMYND10O75800 440 aa21.47■■□□□ 1.03
SCARF1-208ENST00000574545 ENOX2Q16206 610 aaKnown RBP21.47■■□□□ 1.03
SCARF1-208ENST00000574545 KYAT1Q16773 422 aa21.47■■□□□ 1.03
SCARF1-208ENST00000574545 ELMSAN1Q6PJG2 1045 aa21.47■■□□□ 1.03
SCARF1-208ENST00000574545 CCDC149Q6ZUS6 474 aa21.47■■□□□ 1.03
SCARF1-208ENST00000574545 HFE2Q6ZVN8 426 aa21.47■■□□□ 1.03
SCARF1-208ENST00000574545 SFR1Q86XK3 245 aa21.47■■□□□ 1.03
SCARF1-208ENST00000574545 PLCD3Q8N3E9 789 aa21.47■■□□□ 1.03
SCARF1-208ENST00000574545 TMEM130Q8N3G9 435 aa21.47■■□□□ 1.03
SCARF1-208ENST00000574545 ZNF396Q96N95 335 aaPredicted RBP21.47■■□□□ 1.03
SCARF1-208ENST00000574545 PRKD2Q9BZL6 878 aa21.47■■□□□ 1.03
SCARF1-208ENST00000574545 CPSF3Q9UKF6 684 aaKnown RBP21.47■■□□□ 1.03
SCARF1-208ENST00000574545 MYH15Q9Y2K3 1946 aa21.47■■□□□ 1.03
SCARF1-208ENST00000574545 TBC1D4O60343 1298 aa21.46■■□□□ 1.03
SCARF1-208ENST00000574545 N4BP1O75113 896 aaKnown RBP21.46■■□□□ 1.03
SCARF1-208ENST00000574545 YEATS4O95619 227 aa21.46■■□□□ 1.03
SCARF1-208ENST00000574545 F13A1P00488 732 aa21.46■■□□□ 1.03
SCARF1-208ENST00000574545 LRPAP1P30533 357 aa21.46■■□□□ 1.03
SCARF1-208ENST00000574545 OR1D2P34982 312 aa21.46■■□□□ 1.03
SCARF1-208ENST00000574545 MATR3P43243 847 aaKnown RBP eCLIP21.46■■□□□ 1.03
SCARF1-208ENST00000574545 PKP1Q13835 747 aa21.46■■□□□ 1.03
SCARF1-208ENST00000574545 MRPL58Q14197 206 aaKnown RBP21.46■■□□□ 1.03
SCARF1-208ENST00000574545 E2F4Q16254 413 aa21.46■■□□□ 1.03
SCARF1-208ENST00000574545 TDRD5Q8NAT2 981 aaKnown RBP21.46■■□□□ 1.03
SCARF1-208ENST00000574545 ASIC4Q96FT7 647 aa21.46■■□□□ 1.03
SCARF1-208ENST00000574545 SEL1LQ9UBV2 794 aa21.46■■□□□ 1.03
SCARF1-208ENST00000574545 TUBGCP4Q9UGJ1 667 aa21.46■■□□□ 1.03
SCARF1-208ENST00000574545 LACTBL1A8MY62 500 aa21.45■■□□□ 1.02
SCARF1-208ENST00000574545 TISP43B9A030 160 aa21.45■■□□□ 1.02
SCARF1-208ENST00000574545 CYP3A5P20815 502 aa21.45■■□□□ 1.02
SCARF1-208ENST00000574545 STAT6P42226 847 aa21.45■■□□□ 1.02
SCARF1-208ENST00000574545 SPAG1Q07617 926 aa21.45■■□□□ 1.02
SCARF1-208ENST00000574545 SIGLEC14Q08ET2 396 aa21.45■■□□□ 1.02
SCARF1-208ENST00000574545 AXDND1Q5T1B0 1012 aaPredicted RBP21.45■■□□□ 1.02
SCARF1-208ENST00000574545 FOXD4L5Q5VV16 416 aaPredicted RBP21.45■■□□□ 1.02
SCARF1-208ENST00000574545 ANKS3Q6ZW76 656 aa21.45■■□□□ 1.02
SCARF1-208ENST00000574545 OTOP3Q7RTS5 596 aa21.45■■□□□ 1.02
SCARF1-208ENST00000574545 FOXD4L4Q8WXT5 416 aaPredicted RBP21.45■■□□□ 1.02
SCARF1-208ENST00000574545 SMG7Q92540 1137 aaKnown RBP21.45■■□□□ 1.02
SCARF1-208ENST00000574545 IKZF4Q9H2S9 585 aa21.45■■□□□ 1.02
SCARF1-208ENST00000574545 LIMD1Q9UGP4 676 aa21.45■■□□□ 1.02
SCARF1-208ENST00000574545 ARIH1Q9Y4X5 557 aaPredicted RBP21.45■■□□□ 1.02
SCARF1-208ENST00000574545 ZNF318Q5VUA4 2279 aa21.45■■□□□ 1.02
SCARF1-208ENST00000574545 DOCK6Q96HP0 2047 aa21.45■■□□□ 1.02
SCARF1-208ENST00000574545 TMEM221A6NGB7 291 aa21.44■■□□□ 1.02
SCARF1-208ENST00000574545 M0R296 226 aa21.44■■□□□ 1.02
SCARF1-208ENST00000574545 SYN3O14994 580 aa21.44■■□□□ 1.02
SCARF1-208ENST00000574545 GAP43P17677 238 aa21.44■■□□□ 1.02
SCARF1-208ENST00000574545 VARS2Q5ST30 1063 aaKnown RBP21.44■■□□□ 1.02
SCARF1-208ENST00000574545 SLC8B1Q6J4K2 584 aa21.44■■□□□ 1.02
SCARF1-208ENST00000574545 SHC4Q6S5L8 630 aa21.44■■□□□ 1.02
SCARF1-208ENST00000574545 PDILTQ8N807 584 aa21.44■■□□□ 1.02
SCARF1-208ENST00000574545 HVCN1Q96D96 273 aa21.44■■□□□ 1.02
SCARF1-208ENST00000574545 SUSD3Q96L08 255 aa21.44■■□□□ 1.02
SCARF1-208ENST00000574545 TSPAN18Q96SJ8 248 aa21.44■■□□□ 1.02
SCARF1-208ENST00000574545 MSTO1Q9BUK6 570 aa21.44■■□□□ 1.02
SCARF1-208ENST00000574545 OLFML3Q9NRN5 406 aa21.44■■□□□ 1.02
SCARF1-208ENST00000574545 UBQLN1Q9UMX0 589 aaKnown RBP21.44■■□□□ 1.02
SCARF1-208ENST00000574545 SORCS3Q9UPU3 1222 aa21.44■■□□□ 1.02
SCARF1-208ENST00000574545 CDY1Q9Y6F8 540 aa21.44■■□□□ 1.02
SCARF1-208ENST00000574545 ZDBF2Q9HCK1 2354 aa21.43■■□□□ 1.02
SCARF1-208ENST00000574545 CUTAO60888 179 aa21.43■■□□□ 1.02
SCARF1-208ENST00000574545 ASGR2P07307 311 aa21.43■■□□□ 1.02
SCARF1-208ENST00000574545 ADSSP30520 456 aa21.43■■□□□ 1.02
SCARF1-208ENST00000574545 PPP2R3AQ06190 1150 aa21.43■■□□□ 1.02
SCARF1-208ENST00000574545 KCNA1Q09470 495 aa21.43■■□□□ 1.02
SCARF1-208ENST00000574545 ACSF2Q96CM8 615 aaPredicted RBP21.43■■□□□ 1.02
SCARF1-208ENST00000574545 KIF12Q96FN5 646 aa21.43■■□□□ 1.02
SCARF1-208ENST00000574545 RPF1Q9H9Y2 349 aaKnown RBP21.43■■□□□ 1.02
SCARF1-208ENST00000574545 KBTBD4Q9NVX7 518 aa21.43■■□□□ 1.02
SCARF1-208ENST00000574545 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.43■■□□□ 1.02
SCARF1-208ENST00000574545 CLUHO75153 1309 aa21.43■■□□□ 1.02
SCARF1-208ENST00000574545 DOCK8Q8NF50 2099 aa21.43■■□□□ 1.02
SCARF1-208ENST00000574545 ABLIM3O94929 683 aa21.42■■□□□ 1.02
SCARF1-208ENST00000574545 C8AP07357 584 aa21.42■■□□□ 1.02
SCARF1-208ENST00000574545 HSP90AA1P07900 732 aaKnown RBP21.42■■□□□ 1.02
SCARF1-208ENST00000574545 HNRNPA1P09651 372 aaKnown RBP eCLIP21.42■■□□□ 1.02
SCARF1-208ENST00000574545 HOXA9P31269 272 aa21.42■■□□□ 1.02
SCARF1-208ENST00000574545 AARSP49588 968 aaKnown RBP eCLIP21.42■■□□□ 1.02
SCARF1-208ENST00000574545 UVSSAQ2YD98 709 aa21.42■■□□□ 1.02
SCARF1-208ENST00000574545 SPATA1Q5VX52 437 aa21.42■■□□□ 1.02
SCARF1-208ENST00000574545 SLFN12LQ6IEE8 588 aa21.42■■□□□ 1.02
SCARF1-208ENST00000574545 CRELD2Q6UXH1 353 aaPredicted RBP21.42■■□□□ 1.02
SCARF1-208ENST00000574545 CD302Q8IX05 232 aa21.42■■□□□ 1.02
SCARF1-208ENST00000574545 SPRYD3Q8NCJ5 442 aa21.42■■□□□ 1.02
SCARF1-208ENST00000574545 MRPL44Q9H9J2 332 aaKnown RBP21.42■■□□□ 1.02
SCARF1-208ENST00000574545 NUB1Q9Y5A7 615 aa21.42■■□□□ 1.02
SCARF1-208ENST00000574545 M0QZQ0 153 aa21.41■■□□□ 1.02
SCARF1-208ENST00000574545 POU2F2P09086 479 aa21.41■■□□□ 1.02
SCARF1-208ENST00000574545 GUCY2FP51841 1108 aa21.41■■□□□ 1.02
SCARF1-208ENST00000574545 CASP5P51878 434 aa21.41■■□□□ 1.02
SCARF1-208ENST00000574545 POU5F1Q01860 360 aaKnown RBP21.41■■□□□ 1.02
SCARF1-208ENST00000574545 ROR1Q01973 937 aa21.41■■□□□ 1.02
SCARF1-208ENST00000574545 L1TD1Q5T7N2 865 aaKnown RBP21.41■■□□□ 1.02
SCARF1-208ENST00000574545 ATL3Q6DD88 541 aa21.41■■□□□ 1.02
SCARF1-208ENST00000574545 ADALQ6DHV7 355 aa21.41■■□□□ 1.02
SCARF1-208ENST00000574545 RTL10Q7L3V2 364 aa21.41■■□□□ 1.02
SCARF1-208ENST00000574545 STAMQ92783 540 aa21.41■■□□□ 1.02
SCARF1-208ENST00000574545 MYADMQ96S97 322 aa21.41■■□□□ 1.02
SCARF1-208ENST00000574545 FGFBP2Q9BYJ0 223 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms