RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 PRR33A8MZF0 331 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 PODXLO00592 558 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 HNRNPDLO14979 420 aaKnown RBP10.91□□□□□ -0.66
RPA1-206ENST00000573994 ADAM12O43184 909 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 TGM5O43548 720 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 BRD1O95696 1058 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 ASGR2P07307 311 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 CXCL8P10145 99 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 NMT1P30419 496 aaKnown RBP10.91□□□□□ -0.66
RPA1-206ENST00000573994 TXLNAP40222 546 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 BRCC3P46736 316 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 LIG4P49917 911 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 ZNF131P52739 623 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 ZXDAP98168 799 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 CREMQ03060 361 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 SPAG1Q07617 926 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 PTPN21Q16825 1174 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 FOXD4L6Q3SYB3 417 aaPredicted RBP10.91□□□□□ -0.66
RPA1-206ENST00000573994 ZBTB41Q5SVQ8 909 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 ELMSAN1Q6PJG2 1045 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 CD300LGQ6UXG3 332 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 FOXD4L3Q6VB84 417 aaPredicted RBP10.91□□□□□ -0.66
RPA1-206ENST00000573994 ZPBP2Q6X784 338 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 CCDC149Q6ZUS6 474 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 HFE2Q6ZVN8 426 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 HAUS6Q7Z4H7 955 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 GPR149Q86SP6 731 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 PIK3R5Q8WYR1 880 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 EDAQ92838 391 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 SNX21Q969T3 373 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 ACAP3Q96P50 834 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 CCSER1Q9C0I3 900 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 HAPLN2Q9GZV7 340 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 SMOC2Q9H3U7 446 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.91□□□□□ -0.66
RPA1-206ENST00000573994 CNTN3Q9P232 1028 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 TUBGCP4Q9UGJ1 667 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 TBX20Q9UMR3 447 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 HCN4Q9Y3Q4 1203 aa10.91□□□□□ -0.66
RPA1-206ENST00000573994 SRPRBQ9Y5M8 271 aaKnown RBP10.91□□□□□ -0.66
RPA1-206ENST00000573994 TDRD15B5MCY1 1934 aaKnown RBP10.9□□□□□ -0.66
RPA1-206ENST00000573994 A0A087X0B3 334 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 CCDC195A0A1B0GUA6 201 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 TMEM221A6NGB7 291 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 H0YCG3 227 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 TMEM189-UBE2V1I3L0A0 370 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 M0R296 226 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 CLDN3O15551 220 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 HSP90AA1P07900 732 aaKnown RBP10.9□□□□□ -0.66
RPA1-206ENST00000573994 KCNE1P15382 129 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 TKTP29401 623 aaKnown RBP10.9□□□□□ -0.66
RPA1-206ENST00000573994 ABCD1P33897 745 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 MCL1Q07820 350 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 ELAVL2Q12926 359 aaKnown RBP10.9□□□□□ -0.66
RPA1-206ENST00000573994 STK38Q15208 465 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 UPP1Q16831 310 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 XKR4Q5GH76 650 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 RRAGBQ5VZM2 374 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 ALKAL1Q6UXT8 129 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.9□□□□□ -0.66
RPA1-206ENST00000573994 DYMQ7RTS9 669 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 SFR1Q86XK3 245 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 KRI1Q8N9T8 703 aaKnown RBP10.9□□□□□ -0.66
RPA1-206ENST00000573994 KREMEN2Q8NCW0 462 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 LNX1Q8TBB1 728 aaPredicted RBP10.9□□□□□ -0.66
RPA1-206ENST00000573994 SMG7Q92540 1137 aaKnown RBP10.9□□□□□ -0.66
RPA1-206ENST00000573994 ZNF707Q96C28 371 aaPredicted RBP10.9□□□□□ -0.66
RPA1-206ENST00000573994 UROC1Q96N76 676 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 FIZ1Q96SL8 496 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 CLSTN3Q9BQT9 956 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 PANK2Q9BZ23 570 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 SLC38A7Q9NVC3 462 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 FNIP2Q9P278 1114 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 CCDC39Q9UFE4 941 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 MUC6Q6W4X9 2439 aa10.9□□□□□ -0.66
RPA1-206ENST00000573994 CLUHO75153 1309 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 MYMKA6NI61 221 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 TISP43B9A030 160 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 TRAK2O60296 914 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 FGFR3P22607 806 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 DDIT3P35638 169 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 TNFSF9P41273 254 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 STAT6P42226 847 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 NASPP49321 788 aaPredicted RBP10.89□□□□□ -0.67
RPA1-206ENST00000573994 GUCY2FP51841 1108 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 SLC39A14Q15043 492 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 SLC10A6Q3KNW5 377 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 ZC2HC1CQ53FD0 456 aaPredicted RBP10.89□□□□□ -0.67
RPA1-206ENST00000573994 SLC39A4Q6P5W5 647 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 DCLRE1AQ6PJP8 1040 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 RSPO2Q6UXX9 243 aaPredicted RBP10.89□□□□□ -0.67
RPA1-206ENST00000573994 TRIM67Q6ZTA4 783 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 PDILTQ8N807 584 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 CMASQ8NFW8 434 aaPredicted RBP10.89□□□□□ -0.67
RPA1-206ENST00000573994 KCNN1Q92952 543 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 MSTO1Q9BUK6 570 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 IKZF4Q9H2S9 585 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 ZSCAN16Q9H4T2 348 aaPredicted RBP10.89□□□□□ -0.67
RPA1-206ENST00000573994 TFIP11Q9UBB9 837 aaKnown RBP10.89□□□□□ -0.67
RPA1-206ENST00000573994 STK17AQ9UEE5 414 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms