RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 A0A1W2PQ27 194 aa30.2■■■□□ 2.43
SCARF1-207ENST00000573867 A0A1W2PQ64 194 aa30.2■■■□□ 2.43
SCARF1-207ENST00000573867 A0A1W2PQD8 194 aa30.2■■■□□ 2.43
SCARF1-207ENST00000573867 SRGAP2BP0DMP2 458 aa30.2■■■□□ 2.43
SCARF1-207ENST00000573867 GUCY2FP51841 1108 aa30.2■■■□□ 2.43
SCARF1-207ENST00000573867 FAM26FQ5R3K3 315 aa30.2■■■□□ 2.43
SCARF1-207ENST00000573867 GPR65Q8IYL9 337 aa30.2■■■□□ 2.43
SCARF1-207ENST00000573867 C12orf76Q8N812 135 aaPredicted RBP30.2■■■□□ 2.43
SCARF1-207ENST00000573867 FSIP1Q8NA03 581 aa30.2■■■□□ 2.43
SCARF1-207ENST00000573867 SUSD6Q92537 303 aa30.2■■■□□ 2.43
SCARF1-207ENST00000573867 DDX27Q96GQ7 796 aaKnown RBP30.2■■■□□ 2.43
SCARF1-207ENST00000573867 TTPALQ9BTX7 342 aa30.2■■■□□ 2.43
SCARF1-207ENST00000573867 SSX2IPQ9Y2D8 614 aa30.2■■■□□ 2.43
SCARF1-207ENST00000573867 PLXNA3P51805 1871 aa30.19■■■□□ 2.42
SCARF1-207ENST00000573867 KLRC4O43908 158 aa30.19■■■□□ 2.42
SCARF1-207ENST00000573867 FGFR3P22607 806 aa30.19■■■□□ 2.42
SCARF1-207ENST00000573867 CEP57Q86XR8 500 aa30.19■■■□□ 2.42
SCARF1-207ENST00000573867 LNX1Q8TBB1 728 aaPredicted RBP30.19■■■□□ 2.42
SCARF1-207ENST00000573867 PIK3R5Q8WYR1 880 aa30.19■■■□□ 2.42
SCARF1-207ENST00000573867 FAM212AQ96EL1 285 aa30.19■■■□□ 2.42
SCARF1-207ENST00000573867 CBWD1Q9BRT8 395 aa30.19■■■□□ 2.42
SCARF1-207ENST00000573867 BDP1A6H8Y1 2624 aa30.19■■■□□ 2.42
SCARF1-207ENST00000573867 HOXB8P17481 243 aaPredicted RBP30.18■■■□□ 2.42
SCARF1-207ENST00000573867 RPL9P32969 192 aaKnown RBP30.18■■■□□ 2.42
SCARF1-207ENST00000573867 SYKP43405 635 aa30.18■■■□□ 2.42
SCARF1-207ENST00000573867 WNT7BP56706 349 aa30.18■■■□□ 2.42
SCARF1-207ENST00000573867 ZP2Q05996 745 aa30.18■■■□□ 2.42
SCARF1-207ENST00000573867 JADE1Q6IE81 842 aa30.18■■■□□ 2.42
SCARF1-207ENST00000573867 PPFIBP1Q86W92 1011 aa30.18■■■□□ 2.42
SCARF1-207ENST00000573867 GLYCTKQ8IVS8 523 aa30.18■■■□□ 2.42
SCARF1-207ENST00000573867 SYCP3Q8IZU3 236 aa30.18■■■□□ 2.42
SCARF1-207ENST00000573867 SAAL1Q96ER3 474 aa30.18■■■□□ 2.42
SCARF1-207ENST00000573867 FBXL18Q96ME1 805 aa30.18■■■□□ 2.42
SCARF1-207ENST00000573867 FNIP2Q9P278 1114 aa30.18■■■□□ 2.42
SCARF1-207ENST00000573867 FAM50BQ9Y247 325 aa30.18■■■□□ 2.42
SCARF1-207ENST00000573867 TNFRSF10AO00220 468 aa30.17■■■□□ 2.42
SCARF1-207ENST00000573867 ADH1AP07327 375 aa30.17■■■□□ 2.42
SCARF1-207ENST00000573867 NFICP08651 508 aa30.17■■■□□ 2.42
SCARF1-207ENST00000573867 TKTP29401 623 aaKnown RBP30.17■■■□□ 2.42
SCARF1-207ENST00000573867 ELAVL2Q12926 359 aaKnown RBP30.17■■■□□ 2.42
SCARF1-207ENST00000573867 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.17■■■□□ 2.42
SCARF1-207ENST00000573867 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP30.17■■■□□ 2.42
SCARF1-207ENST00000573867 UBQLN1Q9UMX0 589 aaKnown RBP30.17■■■□□ 2.42
SCARF1-207ENST00000573867 ANK1P16157 1881 aa30.16■■■□□ 2.42
SCARF1-207ENST00000573867 PVALEFA0A1B0GWK0 134 aa30.16■■■□□ 2.42
SCARF1-207ENST00000573867 EIF3DO15371 548 aaKnown RBP eCLIP30.16■■■□□ 2.42
SCARF1-207ENST00000573867 ADAM12O43184 909 aa30.16■■■□□ 2.42
SCARF1-207ENST00000573867 LRPAP1P30533 357 aa30.16■■■□□ 2.42
SCARF1-207ENST00000573867 POSTNQ15063 836 aa30.16■■■□□ 2.42
SCARF1-207ENST00000573867 PSMD5Q16401 504 aa30.16■■■□□ 2.42
SCARF1-207ENST00000573867 ZNF507Q8TCN5 953 aa30.16■■■□□ 2.42
SCARF1-207ENST00000573867 SCFD1Q8WVM8 642 aa30.16■■■□□ 2.42
SCARF1-207ENST00000573867 CLSTN3Q9BQT9 956 aa30.16■■■□□ 2.42
SCARF1-207ENST00000573867 FAM213AQ9BRX8 229 aa30.16■■■□□ 2.42
SCARF1-207ENST00000573867 TMEM206Q9H813 350 aa30.16■■■□□ 2.42
SCARF1-207ENST00000573867 DZANK1Q9NVP4 752 aa30.16■■■□□ 2.42
SCARF1-207ENST00000573867 USP25Q9UHP3 1055 aa30.16■■■□□ 2.42
SCARF1-207ENST00000573867 PPEF2O14830 753 aa30.15■■■□□ 2.42
SCARF1-207ENST00000573867 PRR29P0C7W0 189 aa30.15■■■□□ 2.42
SCARF1-207ENST00000573867 GARTP22102 1010 aa30.15■■■□□ 2.42
SCARF1-207ENST00000573867 RARS2Q5T160 578 aaKnown RBP30.15■■■□□ 2.42
SCARF1-207ENST00000573867 RSPO2Q6UXX9 243 aaPredicted RBP30.15■■■□□ 2.42
SCARF1-207ENST00000573867 PALB2Q86YC2 1186 aa30.15■■■□□ 2.42
SCARF1-207ENST00000573867 ADHFE1Q8IWW8 467 aa30.15■■■□□ 2.42
SCARF1-207ENST00000573867 PCIF1Q9H4Z3 704 aa30.15■■■□□ 2.42
SCARF1-207ENST00000573867 SLC39A2Q9NP94 309 aa30.15■■■□□ 2.42
SCARF1-207ENST00000573867 GOLGA8IPA6NC78 632 aa30.14■■■□□ 2.42
SCARF1-207ENST00000573867 GOLGA8JA6NMD2 632 aa30.14■■■□□ 2.42
SCARF1-207ENST00000573867 WEE2P0C1S8 567 aa30.14■■■□□ 2.42
SCARF1-207ENST00000573867 CYP3A5P20815 502 aa30.14■■■□□ 2.42
SCARF1-207ENST00000573867 SPATA1Q5VX52 437 aa30.14■■■□□ 2.42
SCARF1-207ENST00000573867 LILRA6Q6PI73 481 aa30.14■■■□□ 2.42
SCARF1-207ENST00000573867 CD302Q8IX05 232 aa30.14■■■□□ 2.42
SCARF1-207ENST00000573867 EFCAB13Q8IY85 973 aa30.14■■■□□ 2.42
SCARF1-207ENST00000573867 KHSRPQ92945 711 aaKnown RBP eCLIP30.14■■■□□ 2.42
SCARF1-207ENST00000573867 ADAM7Q9H2U9 754 aa30.14■■■□□ 2.42
SCARF1-207ENST00000573867 MAN1C1Q9NR34 630 aa30.14■■■□□ 2.42
SCARF1-207ENST00000573867 PRKAG3Q9UGI9 489 aa30.14■■■□□ 2.42
SCARF1-207ENST00000573867 C19orf67A6NJJ6 358 aa30.13■■■□□ 2.41
SCARF1-207ENST00000573867 TGFB1I1O43294 461 aa30.13■■■□□ 2.41
SCARF1-207ENST00000573867 TGM5O43548 720 aa30.13■■■□□ 2.41
SCARF1-207ENST00000573867 GLUD1P00367 558 aa30.13■■■□□ 2.41
SCARF1-207ENST00000573867 SPATA31D3P0C874 917 aa30.13■■■□□ 2.41
SCARF1-207ENST00000573867 SPATA31D4Q6ZUB0 917 aa30.13■■■□□ 2.41
SCARF1-207ENST00000573867 STXBP4Q6ZWJ1 553 aa30.13■■■□□ 2.41
SCARF1-207ENST00000573867 ASB7Q9H672 318 aa30.13■■■□□ 2.41
SCARF1-207ENST00000573867 POU5F1Q01860 360 aaKnown RBP30.12■■■□□ 2.41
SCARF1-207ENST00000573867 TMEM132DQ14C87 1099 aa30.12■■■□□ 2.41
SCARF1-207ENST00000573867 KMT5BQ4FZB7 885 aa30.12■■■□□ 2.41
SCARF1-207ENST00000573867 ARMCX5Q6P1M9 558 aa30.12■■■□□ 2.41
SCARF1-207ENST00000573867 TMC5Q6UXY8 1006 aa30.12■■■□□ 2.41
SCARF1-207ENST00000573867 KRBA2Q6ZNG9 492 aa30.12■■■□□ 2.41
SCARF1-207ENST00000573867 BRSK2Q8IWQ3 736 aa30.12■■■□□ 2.41
SCARF1-207ENST00000573867 NELFCDQ8IXH7 590 aa30.12■■■□□ 2.41
SCARF1-207ENST00000573867 GJD3Q8N144 294 aa30.12■■■□□ 2.41
SCARF1-207ENST00000573867 SUSD3Q96L08 255 aa30.12■■■□□ 2.41
SCARF1-207ENST00000573867 TSPAN18Q96SJ8 248 aa30.12■■■□□ 2.41
SCARF1-207ENST00000573867 MTRRQ9UBK8 725 aa30.12■■■□□ 2.41
SCARF1-207ENST00000573867 DERAQ9Y315 318 aa30.12■■■□□ 2.41
SCARF1-207ENST00000573867 NUB1Q9Y5A7 615 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms