RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 ERVFC1P60507 584 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 CYP24A1Q07973 514 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 ELAVL2Q12926 359 aaKnown RBP18.7■□□□□ 0.58
LITAF-212ENST00000573332 TIGD5Q53EQ6 642 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 FUT10Q6P4F1 479 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 ZC3H3Q8IXZ2 948 aaKnown RBP18.7■□□□□ 0.58
LITAF-212ENST00000573332 VPS52Q8N1B4 723 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 RDH13Q8NBN7 331 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 NOC3LQ8WTT2 800 aaKnown RBP18.7■□□□□ 0.58
LITAF-212ENST00000573332 CACTINQ8WUQ7 758 aaKnown RBP18.7■□□□□ 0.58
LITAF-212ENST00000573332 TSG101Q99816 390 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 ZBP1Q9H171 429 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 CHST7Q9NS84 486 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 TDRD15B5MCY1 1934 aaKnown RBP18.7■□□□□ 0.58
LITAF-212ENST00000573332 ANO9A1A5B4 782 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 CTSAP10619 480 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 IRS1P35568 1242 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 ENPEPQ07075 957 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 ADAM9Q13443 819 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 BMS1Q14692 1282 aaKnown RBP18.69■□□□□ 0.58
LITAF-212ENST00000573332 ANKRD40Q6AI12 368 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 WDR49Q8IV35 697 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 MLKLQ8NB16 471 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 C3orf58Q8NDZ4 430 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 RABGGTAQ92696 567 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 TCF25Q9BQ70 676 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 MKNK1Q9BUB5 465 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 HERC2P3Q9BVR0 1158 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 GPR62Q9BZJ7 368 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 NSUN3Q9H649 340 aaKnown RBP18.69■□□□□ 0.58
LITAF-212ENST00000573332 DPP3Q9NY33 737 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 FRMD4BQ9Y2L6 1034 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 CITO14578 2027 aa18.69■□□□□ 0.58
LITAF-212ENST00000573332 COL4A4P53420 1690 aaPredicted RBP18.69■□□□□ 0.58
LITAF-212ENST00000573332 SF3B1O75533 1304 aaKnown RBP eCLIP18.69■□□□□ 0.58
LITAF-212ENST00000573332 PIRO00625 290 aa18.68■□□□□ 0.58
LITAF-212ENST00000573332 TRAPPC3O43617 180 aa18.68■□□□□ 0.58
LITAF-212ENST00000573332 CASP4P49662 377 aa18.68■□□□□ 0.58
LITAF-212ENST00000573332 PMS1P54277 932 aaKnown RBP18.68■□□□□ 0.58
LITAF-212ENST00000573332 CLDN10P78369 228 aa18.68■□□□□ 0.58
LITAF-212ENST00000573332 FKBP3Q00688 224 aaKnown RBP18.68■□□□□ 0.58
LITAF-212ENST00000573332 TMC7Q7Z402 723 aa18.68■□□□□ 0.58
LITAF-212ENST00000573332 MRPL43Q8N983 215 aaKnown RBP18.68■□□□□ 0.58
LITAF-212ENST00000573332 TMC2Q8TDI7 906 aa18.68■□□□□ 0.58
LITAF-212ENST00000573332 GZF1Q9H116 711 aaPredicted RBP18.68■□□□□ 0.58
LITAF-212ENST00000573332 INTS13Q9NVM9 706 aa18.68■□□□□ 0.58
LITAF-212ENST00000573332 SSX2IPQ9Y2D8 614 aa18.68■□□□□ 0.58
LITAF-212ENST00000573332 BICDL2A1A5D9 508 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 CETN3O15182 167 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 LILRB3O75022 631 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 AKAP3O75969 853 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 IGFBP6P24592 240 aaPredicted RBP18.67■□□□□ 0.58
LITAF-212ENST00000573332 PSMC2P35998 433 aaKnown RBP18.67■□□□□ 0.58
LITAF-212ENST00000573332 AARSP49588 968 aaKnown RBP eCLIP18.67■□□□□ 0.58
LITAF-212ENST00000573332 TFAMQ00059 246 aaKnown RBP18.67■□□□□ 0.58
LITAF-212ENST00000573332 SMC1AQ14683 1233 aaKnown RBP18.67■□□□□ 0.58
LITAF-212ENST00000573332 DUOXA2Q1HG44 320 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 USP41Q3LFD5 358 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 CCDC183Q5T5S1 534 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 C9orf57Q5W0N0 161 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 CEP135Q66GS9 1140 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 TTI2Q6NXR4 508 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 TAS1R1Q7RTX1 841 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 MICAL1Q8TDZ2 1067 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 PARD3BQ8TEW8 1205 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 PPP2R3CQ969Q6 453 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 FNBP1Q96RU3 617 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 CGRRF1Q99675 332 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 ENTPD7Q9NQZ7 604 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 CDH23Q9H251 3354 aa18.67■□□□□ 0.58
LITAF-212ENST00000573332 CXCL14O95715 111 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 TMEM191BP0C7N4 346 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 GUCY2FP51841 1108 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 AP3M2P53677 418 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 NLRP12P59046 1061 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 DSG1Q02413 1049 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 PAK1Q13153 545 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 KIAA0319Q5VV43 1072 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 INTS8Q75QN2 995 aaKnown RBP18.66■□□□□ 0.58
LITAF-212ENST00000573332 C1orf127Q8N9H9 656 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 CXorf38Q8TB03 319 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 PLEKHO2Q8TD55 490 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 HASPINQ8TF76 798 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 NELFBQ8WX92 580 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 ANKRD36BP1Q96IX9 119 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 ITGA11Q9UKX5 1188 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 NUB1Q9Y5A7 615 aa18.66■□□□□ 0.58
LITAF-212ENST00000573332 PLXNA4Q9HCM2 1894 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 TRIM49BA6NDI0 452 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 C2orf71A6NGG8 1288 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 IKBKBO14920 756 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 SLC16A3O15427 465 aaKnown RBP18.65■□□□□ 0.58
LITAF-212ENST00000573332 URODP06132 367 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 FGFR3P22607 806 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 BRCC3P46736 316 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 GLUD2P49448 558 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 PTPN14Q15678 1187 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 KLHL40Q2TBA0 621 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 TCEAL5Q5H9L2 206 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 CT47A1Q5JQC4 288 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms