RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 CREMQ03060 361 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 MCL1Q07820 350 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 NAB2Q15742 525 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 ELMSAN1Q6PJG2 1045 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 ALKAL1Q6UXT8 129 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 DYMQ7RTS9 669 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 CEP57Q86XR8 500 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 PDILTQ8N807 584 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 RIN2Q8WYP3 895 aaPredicted RBP9.91□□□□□ -0.82
NDE1-207ENST00000573203 RPGRIP1Q96KN7 1286 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 B3GALT6Q96L58 329 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 SNX27Q96L92 541 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 RIPOR3Q96MK2 946 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 UROC1Q96N76 676 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 RXFP1Q9HBX9 757 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.91□□□□□ -0.82
NDE1-207ENST00000573203 CHST7Q9NS84 486 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 SLC38A7Q9NVC3 462 aa9.91□□□□□ -0.82
NDE1-207ENST00000573203 MTCL1Q9Y4B5 1905 aaKnown RBP9.91□□□□□ -0.82
NDE1-207ENST00000573203 MYMKA6NI61 221 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 LOC730098B7Z3J9 87 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 BHMG1C9JSJ3 638 aaPredicted RBP9.9□□□□□ -0.82
NDE1-207ENST00000573203 DCXO43602 365 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 CUTAO60888 179 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 PPP6R2O75170 966 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 B3GAT3O94766 335 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 GLUD1P00367 558 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 WEE2P0C1S8 567 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 IDEP14735 1019 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 KCNE1P15382 129 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 NMT1P30419 496 aaKnown RBP9.9□□□□□ -0.82
NDE1-207ENST00000573203 MTHFRP42898 656 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 CLCNKBP51801 687 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 ELAVL2Q12926 359 aaKnown RBP9.9□□□□□ -0.82
NDE1-207ENST00000573203 SEZ6Q53EL9 994 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 XKR4Q5GH76 650 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 FAM171A1Q5VUB5 890 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 KANK3Q6NY19 840 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 DCLRE1AQ6PJP8 1040 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 TMC5Q6UXY8 1006 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 SFR1Q86XK3 245 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 PALB2Q86YC2 1186 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 RNF135Q8IUD6 432 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 GLYCTKQ8IVS8 523 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 GPR65Q8IYL9 337 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 KCNN1Q92952 543 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 ZMAT2Q96NC0 199 aaKnown RBP9.9□□□□□ -0.82
NDE1-207ENST00000573203 NECTIN4Q96NY8 510 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 TTPALQ9BTX7 342 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 SFXN1Q9H9B4 322 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 GOLGA2P5Q9HBQ8 144 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 MAN1C1Q9NR34 630 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 CNTN3Q9P232 1028 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 FNIP2Q9P278 1114 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 DPP7Q9UHL4 492 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 CDH22Q9UJ99 828 aa9.9□□□□□ -0.82
NDE1-207ENST00000573203 VWA8A3KMH1 1905 aa9.9□□□□□ -0.83
NDE1-207ENST00000573203 C2orf16Q68DN1 1984 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 A0A087X0B3 334 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 TMEM189-UBE2V1I3L0A0 370 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 PODXLO00592 558 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 OGTO15294 1046 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 TRAPPC3O43617 180 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 PIGRP01833 764 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 CLTAP09496 248 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 CXCL8P10145 99 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 MYBP10242 640 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 RPL17P18621 184 aaKnown RBP9.89□□□□□ -0.83
NDE1-207ENST00000573203 SP100P23497 879 aaPredicted RBP9.89□□□□□ -0.83
NDE1-207ENST00000573203 GTF2BQ00403 316 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 SOX4Q06945 474 aaPredicted RBP9.89□□□□□ -0.83
NDE1-207ENST00000573203 PSMD5Q16401 504 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 KYAT1Q16773 422 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 UPP1Q16831 310 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 SLC10A6Q3KNW5 377 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 ZSCAN23Q3MJ62 389 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 ZC2HC1CQ53FD0 456 aaPredicted RBP9.89□□□□□ -0.83
NDE1-207ENST00000573203 RTP2Q5QGT7 225 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 ATAT1Q5SQI0 421 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 CAVIN1Q6NZI2 390 aaKnown RBP9.89□□□□□ -0.83
NDE1-207ENST00000573203 PDXDC1Q6P996 788 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 PRSS55Q6UWB4 352 aaPredicted RBP9.89□□□□□ -0.83
NDE1-207ENST00000573203 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.89□□□□□ -0.83
NDE1-207ENST00000573203 MAP4K3Q8IVH8 894 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 KCNG4Q8TDN1 519 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 LEO1Q8WVC0 666 aaPredicted RBP9.89□□□□□ -0.83
NDE1-207ENST00000573203 PIK3R5Q8WYR1 880 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 C18orf25Q96B23 403 aaPredicted RBP9.89□□□□□ -0.83
NDE1-207ENST00000573203 DNAJC19Q96DA6 116 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 SPATA32Q96LK8 384 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 FIZ1Q96SL8 496 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 MSTO1Q9BUK6 570 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 HAPLN2Q9GZV7 340 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 GZF1Q9H116 711 aaPredicted RBP9.89□□□□□ -0.83
NDE1-207ENST00000573203 ST6GALNAC4Q9H4F1 302 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 POMKQ9H5K3 350 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 MRPL44Q9H9J2 332 aaKnown RBP9.89□□□□□ -0.83
NDE1-207ENST00000573203 SEL1LQ9UBV2 794 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 NR2E1Q9Y466 385 aa9.89□□□□□ -0.83
NDE1-207ENST00000573203 A0A0B4J269 797 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms