RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 POLD4Q9HCU8 107 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 HCFC1R1Q9NWW0 138 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 CNTN3Q9P232 1028 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 NUB1Q9Y5A7 615 aa17.02■□□□□ 0.32
TSR1-202ENST00000571806 E9PMD0 336 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 PROZP22891 400 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 BRCC3P46736 316 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 SMTNP53814 917 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 ROR1Q01973 937 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 VARS2Q5ST30 1063 aaKnown RBP17.01■□□□□ 0.31
TSR1-202ENST00000571806 ZBTB41Q5SVQ8 909 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 RINT1Q6NUQ1 792 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 C1orf186Q6ZWK4 172 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 ELMOD1Q8N336 334 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 C3orf58Q8NDZ4 430 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 SPIRE2Q8WWL2 714 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 ELSPBP1Q96BH3 223 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 OXCT2Q9BYC2 517 aaPredicted RBP17.01■□□□□ 0.31
TSR1-202ENST00000571806 KCND2Q9NZV8 630 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 MRPS17Q9Y2R5 130 aaKnown RBP17.01■□□□□ 0.31
TSR1-202ENST00000571806 PCDHB6Q9Y5E3 794 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 R4GN57 208 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 FAM186AA6NE01 2351 aa17.01■□□□□ 0.31
TSR1-202ENST00000571806 FAM170BA6NMN3 283 aa17■□□□□ 0.31
TSR1-202ENST00000571806 LAMTOR5O43504 91 aa17■□□□□ 0.31
TSR1-202ENST00000571806 TBC1D4O60343 1298 aa17■□□□□ 0.31
TSR1-202ENST00000571806 TOM1L1O75674 476 aa17■□□□□ 0.31
TSR1-202ENST00000571806 GUCY2CP25092 1073 aa17■□□□□ 0.31
TSR1-202ENST00000571806 TOB1P50616 345 aaPredicted RBP17■□□□□ 0.31
TSR1-202ENST00000571806 OSTNP61366 133 aa17■□□□□ 0.31
TSR1-202ENST00000571806 SOX4Q06945 474 aaPredicted RBP17■□□□□ 0.31
TSR1-202ENST00000571806 MRPL58Q14197 206 aaKnown RBP17■□□□□ 0.31
TSR1-202ENST00000571806 RIF1Q5UIP0 2472 aaKnown RBP17■□□□□ 0.31
TSR1-202ENST00000571806 DAW1Q8N136 415 aa17■□□□□ 0.31
TSR1-202ENST00000571806 CEP120Q8N960 986 aa17■□□□□ 0.31
TSR1-202ENST00000571806 LEMD2Q8NC56 503 aa17■□□□□ 0.31
TSR1-202ENST00000571806 APPL2Q8NEU8 664 aa17■□□□□ 0.31
TSR1-202ENST00000571806 ST13P5Q8NFI4 369 aaPredicted RBP17■□□□□ 0.31
TSR1-202ENST00000571806 RUBCNQ92622 972 aa17■□□□□ 0.31
TSR1-202ENST00000571806 KXD1Q9BQD3 176 aa17■□□□□ 0.31
TSR1-202ENST00000571806 TARS2Q9BW92 718 aaKnown RBP17■□□□□ 0.31
TSR1-202ENST00000571806 TRIP11Q15643 1979 aa17■□□□□ 0.31
TSR1-202ENST00000571806 MIA3Q5JRA6 1907 aa17■□□□□ 0.31
TSR1-202ENST00000571806 DOCK6Q96HP0 2047 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 WDR27A2RRH5 827 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 H0YCG3 227 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 I3L4J1 428 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 KINO60870 393 aaKnown RBP16.99■□□□□ 0.31
TSR1-202ENST00000571806 SEC24BO95487 1268 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 GLULP15104 373 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 SCP2P22307 547 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 IGFBP6P24592 240 aaPredicted RBP16.99■□□□□ 0.31
TSR1-202ENST00000571806 RPS9P46781 194 aaKnown RBP16.99■□□□□ 0.31
TSR1-202ENST00000571806 NBR1Q14596 966 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 UBXN2BQ14CS0 331 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 RILPL1Q5EBL4 403 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 IQCEQ6IPM2 695 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 ZNF280DQ6N043 979 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 ZPBP2Q6X784 338 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 ZNF852Q6ZMS4 543 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 TAS1R3Q7RTX0 852 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 DNASE1L2Q92874 299 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 MCRS1Q96EZ8 462 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 SUSD3Q96L08 255 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 ZMAT2Q96NC0 199 aaKnown RBP16.99■□□□□ 0.31
TSR1-202ENST00000571806 PLEKHA5Q9HAU0 1116 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 CYP4F11Q9HBI6 524 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 LTB4R2Q9NPC1 389 aa16.99■□□□□ 0.31
TSR1-202ENST00000571806 SPATA6Q9NWH7 488 aaPredicted RBP16.99■□□□□ 0.31
TSR1-202ENST00000571806 NOTCH4Q99466 2003 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 ABLIM1O14639 778 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 SPTLC1O15269 473 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 CLDN3O15551 220 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 PLS3P13797 630 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 MARCKSP29966 332 aaPredicted RBP16.98■□□□□ 0.31
TSR1-202ENST00000571806 MAPK7Q13164 816 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 NOLC1Q14978 699 aaKnown RBP eCLIP16.98■□□□□ 0.31
TSR1-202ENST00000571806 KYAT1Q16773 422 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 CTXN3Q4LDR2 81 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 HYIQ5T013 277 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 CYP4A22Q5TCH4 519 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 PDZD4Q76G19 769 aaPredicted RBP16.98■□□□□ 0.31
TSR1-202ENST00000571806 ING5Q8WYH8 240 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 CLDN23Q96B33 292 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 ZNF512Q96ME7 567 aaPredicted RBP16.98■□□□□ 0.31
TSR1-202ENST00000571806 TSPAN18Q96SJ8 248 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 RUSC1Q9BVN2 902 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 ZFP14Q9HCL3 533 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.98■□□□□ 0.31
TSR1-202ENST00000571806 PCDHGA2Q9Y5H1 932 aa16.98■□□□□ 0.31
TSR1-202ENST00000571806 CITO14578 2027 aa16.97■□□□□ 0.31
TSR1-202ENST00000571806 FANCMQ8IYD8 2048 aa16.97■□□□□ 0.31
TSR1-202ENST00000571806 MAN2B1O00754 1011 aa16.97■□□□□ 0.31
TSR1-202ENST00000571806 SLC16A4O15374 487 aa16.97■□□□□ 0.31
TSR1-202ENST00000571806 MCM4P33991 863 aa16.97■□□□□ 0.31
TSR1-202ENST00000571806 ARPP19P56211 112 aa16.97■□□□□ 0.31
TSR1-202ENST00000571806 SLC5A9Q2M3M2 681 aa16.97■□□□□ 0.31
TSR1-202ENST00000571806 PRSS36Q5K4E3 855 aa16.97■□□□□ 0.31
TSR1-202ENST00000571806 MAML2Q8IZL2 1156 aaPredicted RBP16.97■□□□□ 0.31
TSR1-202ENST00000571806 SYT2Q8N9I0 419 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms