RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SORBS3O60504 671 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 ENTPD3O75355 529 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 CCND1P24385 295 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 WDR4P57081 412 aaKnown RBP18.57■□□□□ 0.56
SCARF1-205ENST00000571272 STRN3Q13033 797 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 LMBRD2Q68DH5 695 aaPredicted RBP18.57■□□□□ 0.56
SCARF1-205ENST00000571272 SYDE1Q6ZW31 735 aaPredicted RBP18.57■□□□□ 0.56
SCARF1-205ENST00000571272 GSTA5Q7RTV2 222 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 USP20Q9Y2K6 914 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 COQ4Q9Y3A0 265 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 NRXN2Q9P2S2 1712 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 MAN1A1P33908 653 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 DNAJC3Q13217 504 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 CAPN12Q6ZSI9 719 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 MAIP1Q8WWC4 291 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 MRRFQ96E11 262 aaKnown RBP18.57■□□□□ 0.56
SCARF1-205ENST00000571272 ZNF570Q96NI8 536 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 PLCD4Q9BRC7 762 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 ADAM22Q9P0K1 906 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 CCPG1Q9ULG6 757 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 ATRNL1Q5VV63 1379 aa18.57■□□□□ 0.56
SCARF1-205ENST00000571272 DENND3A2RUS2 1198 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 UNGP13051 313 aaPredicted RBP18.56■□□□□ 0.56
SCARF1-205ENST00000571272 CD58P19256 250 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 CAV1Q03135 178 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 CC2D2BQ6DHV5 1058 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 ANKS1BQ7Z6G8 1248 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 PASD1Q8IV76 773 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 TMEM174Q8WUU8 243 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 POMGNT1Q8WZA1 660 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 RBM15Q96T37 977 aaKnown RBP eCLIP18.56■□□□□ 0.56
SCARF1-205ENST00000571272 CCDC77Q9BR77 488 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 KLHL11Q9NVR0 708 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 LGALS13Q9UHV8 139 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.56■□□□□ 0.56
SCARF1-205ENST00000571272 ADGRA3Q8IWK6 1321 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 TCEA3O75764 348 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 NCKAP1LP55160 1127 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 TAS2R40P59535 323 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 LACTBP83111 547 aaPredicted RBP18.56■□□□□ 0.56
SCARF1-205ENST00000571272 TKFCQ3LXA3 575 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 TMEM161BQ8NDZ6 487 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 KIF9Q9HAQ2 790 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 AGO4Q9HCK5 861 aaKnown RBP18.56■□□□□ 0.56
SCARF1-205ENST00000571272 HOMER2Q9NSB8 354 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 ASTN2O75129 1339 aaPredicted RBP18.56■□□□□ 0.56
SCARF1-205ENST00000571272 ANKRD31Q8N7Z5 1873 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 NPTX2P47972 431 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 IL9RQ01113 521 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 MKRN3Q13064 507 aaKnown RBP18.56■□□□□ 0.56
SCARF1-205ENST00000571272 P3H1Q32P28 736 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 CPXCR1Q8N123 301 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 KCNV2Q8TDN2 545 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 IWS1Q96ST2 819 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 MYLK2Q9H1R3 596 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 SLCO1B3Q9NPD5 702 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 NEU2Q9Y3R4 380 aa18.56■□□□□ 0.56
SCARF1-205ENST00000571272 SLX4Q8IY92 1834 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 POC1B-GALNT4F8VUJ3 575 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 CFHP08603 1231 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 MAGEA4P43358 317 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 ATP11AP98196 1134 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 KLF1Q13351 362 aaPredicted RBP18.55■□□□□ 0.56
SCARF1-205ENST00000571272 AOC3Q16853 763 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 PPP1R21Q6ZMI0 780 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 CDAN1Q8IWY9 1227 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 CCDC89Q8N998 374 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 C11orf70Q9BRQ4 267 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 FAM47DPA6NHR8 397 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 UNC5CO95185 931 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 FDX1P10109 184 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 NSFP46459 744 aaKnown RBP18.55■□□□□ 0.56
SCARF1-205ENST00000571272 MRPS9P82933 396 aaKnown RBP18.55■□□□□ 0.56
SCARF1-205ENST00000571272 MTMR1Q13613 665 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 STAT4Q14765 748 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 KAZNQ674X7 775 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 RNF43Q68DV7 783 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 SLC39A4Q6P5W5 647 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 MYPNQ86TC9 1320 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 ANKRD35Q8N283 1001 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 GLIS1Q8NBF1 620 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 ERP27Q96DN0 273 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 MASTLQ96GX5 879 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 TMEM237Q96Q45 408 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 OSBPL8Q9BZF1 889 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 ST6GALNAC4Q9H4F1 302 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 SAYSD1Q9NPB0 183 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 EXOC7Q9UPT5 735 aa18.55■□□□□ 0.56
SCARF1-205ENST00000571272 EXOC1LA0A1B0GW35 172 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 NEBLO76041 1014 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 EIF2AK2P19525 551 aaKnown RBP18.54■□□□□ 0.56
SCARF1-205ENST00000571272 SLC8A3P57103 927 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 ZFYVE27Q5T4F4 411 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 BZW1Q7L1Q6 419 aaKnown RBP18.54■□□□□ 0.56
SCARF1-205ENST00000571272 VSIG1Q86XK7 387 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 MAB21L3Q8N8X9 362 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 SLC17A8Q8NDX2 589 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 UTP4Q969X6 686 aaKnown RBP18.54■□□□□ 0.56
SCARF1-205ENST00000571272 PI4K2BG5E9Z4 385 aa18.54■□□□□ 0.56
SCARF1-205ENST00000571272 ATP9AO75110 1047 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms