RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 GLB1LQ6UWU2 654 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 CCDC150Q8NCX0 1101 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 LMO3Q8TAP4 145 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 BADQ92934 168 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 C18orf25Q96B23 403 aaPredicted RBP16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 VWCEQ96DN2 955 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 IQCDQ96DY2 449 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 IMPG2Q9BZV3 1241 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 GANQ9H2C0 597 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 ELAC1Q9H777 363 aaKnown RBP16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 SIX2Q9NPC8 291 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 IL23AQ9NPF7 189 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 DPP3Q9NY33 737 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 ITGA11Q9UKX5 1188 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 R3HCC1Q9Y3T6 440 aaKnown RBP16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 CITO14578 2027 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 GYPCP04921 128 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 ITGB3P05106 788 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 ACRP10323 421 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 POLR2BP30876 1174 aaKnown RBP16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 FPGSQ05932 587 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 TBX2Q13207 712 aaPredicted RBP16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 FIGNQ5HY92 759 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 WDR44Q5JSH3 913 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 KLHDC7AQ5VTJ3 777 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 TMEM130Q8N3G9 435 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 HELQQ8TDG4 1101 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 CPLX3Q8WVH0 158 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 NT5C1BQ96P26 610 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 PPP1R10Q96QC0 940 aaKnown RBP16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 PI4K2AQ9BTU6 479 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 SLC38A7Q9NVC3 462 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 RNF216Q9NWF9 866 aaPredicted RBP16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 SIX4Q9UIU6 781 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 ZMYND8Q9ULU4 1186 aaPredicted RBP16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 PCDHB7Q9Y5E2 793 aa16.62■□□□□ 0.25
HERPUD1-219ENST00000570273 TET1Q8NFU7 2136 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 ABHD14A-ACY1A0A1B0GW23 586 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 ZC3H11AO75152 810 aaKnown RBP eCLIP16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 LRRN2O75325 713 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 NOL4O94818 638 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 THP07101 528 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 FGFR1P11362 822 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 SYN1P17600 705 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 CASP14P31944 242 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 MYL6P60660 151 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 POLR2FP61218 127 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 ZBTB6Q15916 424 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 ZNF699Q32M78 642 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 CLLU1OSQ5K130 101 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 GJB7Q6PEY0 223 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 CACNA2D4Q7Z3S7 1137 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 NPAS4Q8IUM7 802 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 URGCPQ8TCY9 931 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 DPF3Q92784 378 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 TTYH3Q9C0H2 523 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 CEP72Q9P209 647 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 APEX2Q9UBZ4 518 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 PLAGL2Q9UPG8 496 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 FHOD1Q9Y613 1164 aa16.61■□□□□ 0.25
HERPUD1-219ENST00000570273 A0A1W2PQJ5 194 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 AKR1B15C9JRZ8 316 aaPredicted RBP16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 HOXA2O43364 376 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 EFCAB14O75071 495 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 OFD1O75665 1012 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 POMCP01189 267 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 UCHL3P15374 230 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 CYP3A5P20815 502 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 DEKP35659 375 aaKnown RBP16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 GSDMDP57764 484 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 NOP14P78316 857 aaKnown RBP16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 RBP5P82980 135 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 SOX4Q06945 474 aaPredicted RBP16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 GOLGA8FQ08AF8 430 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 GOLGA8DPQ0D2H9 430 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 GRIK3Q13003 919 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 NOMO2Q5JPE7 1267 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 IQCEQ6IPM2 695 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 DPY19L2P1Q6NXN4 242 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 CCDC186Q7Z3E2 898 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 ARHGEF19Q8IW93 802 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 ABI1Q8IZP0 508 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 GSTCDQ8NEC7 633 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 ELMO3Q96BJ8 720 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 NLRC4Q9NPP4 1024 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 MIOSQ9NXC5 875 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 AGAP1Q9UPQ3 857 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 DAAM1Q9Y4D1 1078 aa16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.6■□□□□ 0.25
HERPUD1-219ENST00000570273 INPPL1O15357 1258 aa16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 MFAP3LO75121 409 aa16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 ASS1P00966 412 aaKnown RBP16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 CST3P01034 146 aaPredicted RBP16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 AMHP03971 560 aa16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 RFX1P22670 979 aa16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 FXR1P51114 621 aaKnown RBP eCLIP16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 AFF1P51825 1210 aaKnown RBP16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 RAPGEF1Q13905 1077 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms