RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 NR1I3Q14994 352 aa13.32□□□□□ -0.28
NUP93-220ENST00000569842 NAB2Q15742 525 aa13.32□□□□□ -0.28
NUP93-220ENST00000569842 PAN2Q504Q3 1202 aaKnown RBP13.32□□□□□ -0.28
NUP93-220ENST00000569842 FKBP15Q5T1M5 1219 aa13.32□□□□□ -0.28
NUP93-220ENST00000569842 C1orf127Q8N9H9 656 aa13.32□□□□□ -0.28
NUP93-220ENST00000569842 CRACR2AQ9BSW2 395 aa13.32□□□□□ -0.28
NUP93-220ENST00000569842 GOLGA2P5Q9HBQ8 144 aa13.32□□□□□ -0.28
NUP93-220ENST00000569842 TBC1D13Q9NVG8 400 aa13.32□□□□□ -0.28
NUP93-220ENST00000569842 KANSL3Q9P2N6 904 aa13.32□□□□□ -0.28
NUP93-220ENST00000569842 XPOTO43592 962 aaKnown RBP13.31□□□□□ -0.28
NUP93-220ENST00000569842 N4BP1O75113 896 aaKnown RBP13.31□□□□□ -0.28
NUP93-220ENST00000569842 RNASELQ05823 741 aaKnown RBP13.31□□□□□ -0.28
NUP93-220ENST00000569842 SHHQ15465 462 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 PTPN21Q16825 1174 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 TAS1R2Q8TE23 839 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 GDF15Q99988 308 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 UBE2OQ9C0C9 1292 aaKnown RBP13.31□□□□□ -0.28
NUP93-220ENST00000569842 TRIP11Q15643 1979 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 CBFA2T2O43439 604 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 VNN1O95497 513 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 ITGB3P05106 788 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 KRT19P08727 400 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 CYP3A5P20815 502 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 RASIP1Q5U651 963 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 ZNF280BQ86YH2 543 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 CACNG4Q9UBN1 327 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 RALGAPA2Q2PPJ7 1873 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 GJB5O95377 273 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 CST3P01034 146 aaPredicted RBP13.31□□□□□ -0.28
NUP93-220ENST00000569842 ATP2A2P16615 1042 aaKnown RBP13.31□□□□□ -0.28
NUP93-220ENST00000569842 MRE11P49959 708 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 CETN1Q12798 172 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 FBXL13Q8NEE6 735 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 RNPC3Q96LT9 517 aaKnown RBP13.31□□□□□ -0.28
NUP93-220ENST00000569842 SLC9A7Q96T83 725 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 ZBED2Q9BTP6 218 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 SIX4Q9UIU6 781 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 ITGA11Q9UKX5 1188 aa13.31□□□□□ -0.28
NUP93-220ENST00000569842 CASTOR2A6NHX0 329 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 PMM2O15305 246 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 P4HA2O15460 535 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 LRRN2O75325 713 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 DDHD2O94830 711 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 HLA-DRAP01903 254 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 TPM3P06753 285 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 POLR2BP30876 1174 aaKnown RBP13.3□□□□□ -0.28
NUP93-220ENST00000569842 PIK3CAP42336 1068 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 TRPC3Q13507 836 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 NCOA4Q13772 614 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 GBP6Q6ZN66 633 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 CXorf38Q8TB03 319 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 PHOSPHO2Q8TCD6 241 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 SEMA4DQ92854 862 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 ZNF689Q96CS4 500 aaPredicted RBP13.3□□□□□ -0.28
NUP93-220ENST00000569842 YME1L1Q96TA2 773 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 MRPL9Q9BYD2 267 aaKnown RBP13.3□□□□□ -0.28
NUP93-220ENST00000569842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.3□□□□□ -0.281e-6■■■■■ 70.1
NUP93-220ENST00000569842 GCNT4Q9P109 453 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 HCSTQ9UBK5 93 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 AGAP1Q9UPQ3 857 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 COQ4Q9Y3A0 265 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 TNRC18O15417 2968 aaPredicted RBP13.3□□□□□ -0.28
NUP93-220ENST00000569842 B4GALT3O60512 393 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 TUSC3Q13454 348 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 EXOC3L4Q17RC7 722 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 EPC2Q52LR7 807 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 HERC6Q8IVU3 1022 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 RSPH1Q8WYR4 309 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 RABGGTAQ92696 567 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 ELMO3Q96BJ8 720 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 FAM193BQ96PV7 902 aaPredicted RBP13.3□□□□□ -0.28
NUP93-220ENST00000569842 RC3H2Q9HBD1 1191 aaKnown RBP13.3□□□□□ -0.28
NUP93-220ENST00000569842 RAB20Q9NX57 234 aa13.3□□□□□ -0.28
NUP93-220ENST00000569842 GTPBP10A4D1E9 387 aaKnown RBP13.29□□□□□ -0.28
NUP93-220ENST00000569842 PPEF2O14830 753 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 ZNF75DP51815 510 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 MYL6P60660 151 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 RBP5P82980 135 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 KCNMA1Q12791 1236 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 SYCP1Q15431 976 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 C9orf57Q5W0N0 161 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 LRRC43Q8N309 656 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 PAAF1Q9BRP4 392 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 PI4K2AQ9BTU6 479 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 R3HCC1Q9Y3T6 440 aaKnown RBP13.29□□□□□ -0.28
NUP93-220ENST00000569842 SLC9A1P19634 815 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 KLK7P49862 253 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 CLCNKBP51801 687 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 DSC1Q08554 894 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 BTG3Q14201 252 aaPredicted RBP13.29□□□□□ -0.28
NUP93-220ENST00000569842 EHBP1Q8NDI1 1231 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 LMO3Q8TAP4 145 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 INTS2Q9H0H0 1204 aaKnown RBP13.29□□□□□ -0.28
NUP93-220ENST00000569842 NRDE2Q9H7Z3 1164 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 DNAJB4Q9UDY4 337 aa13.29□□□□□ -0.28
NUP93-220ENST00000569842 ANO9A1A5B4 782 aa13.28□□□□□ -0.28
NUP93-220ENST00000569842 ZC3H11AO75152 810 aaKnown RBP eCLIP13.28□□□□□ -0.28
NUP93-220ENST00000569842 CLSTN1O94985 981 aa13.28□□□□□ -0.28
NUP93-220ENST00000569842 ADCY5O95622 1261 aa13.28□□□□□ -0.28
NUP93-220ENST00000569842 PON1P27169 355 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms