RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 MAGEA10P43363 369 aaPredicted RBP7.11□□□□□ -1.27
SMG1-217ENST00000569764 VPS41P49754 854 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 ARPC4P59998 168 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 RESTQ13127 1097 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 NR1H3Q13133 447 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 AP3B2Q13367 1082 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 KDELC1Q6UW63 502 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 PPP1R21Q6ZMI0 780 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 KDELC2Q7Z4H8 507 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 LRRC49Q8IUZ0 686 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 MYCT1Q8N699 235 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 TEX9Q8N6V9 391 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 PHOSPHO2Q8TCD6 241 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 PGBD1Q96JS3 809 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 TOX2Q96NM4 488 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 EMILIN2Q9BXX0 1053 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 TRPV5Q9NQA5 729 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 C1orf112Q9NSG2 853 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 PNMA8BQ9ULN7 279 aaPredicted RBP7.11□□□□□ -1.27
SMG1-217ENST00000569764 PCDHB8Q9UN66 801 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 EFR3BQ9Y2G0 817 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 PCDHB13Q9Y5F0 798 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 TIAM2Q8IVF5 1701 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 WDR19Q8NEZ3 1342 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 KRBA1A5PL33 1030 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 CLASP2O75122 1294 aaKnown RBP7.1□□□□□ -1.27
SMG1-217ENST00000569764 SNUPNO95149 360 aaKnown RBP7.1□□□□□ -1.27
SMG1-217ENST00000569764 KCNH1O95259 989 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 PRLRP16471 622 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 BLVRAP53004 296 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 CBX2Q14781 532 aaPredicted RBP7.1□□□□□ -1.27
SMG1-217ENST00000569764 POSTNQ15063 836 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 LETM2Q2VYF4 491 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 MMEL1Q495T6 779 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 ARSHQ5FYA8 562 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 C12orf60Q5U649 245 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 ZC3H14Q6PJT7 736 aaKnown RBP7.1□□□□□ -1.27
SMG1-217ENST00000569764 SPOCD1Q6ZMY3 1216 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 BEND5Q7L4P6 421 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 CMTR1Q8N1G2 835 aaKnown RBP7.1□□□□□ -1.27
SMG1-217ENST00000569764 ZNF540Q8NDQ6 660 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 MDM1Q8TC05 714 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 CPLX3Q8WVH0 158 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 SLC7A3Q8WY07 619 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 GPRASP2Q96D09 838 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 ATG4CQ96DT6 458 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 UBN1Q9NPG3 1134 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 DCP1AQ9NPI6 582 aaPredicted RBP7.1□□□□□ -1.27
SMG1-217ENST00000569764 KANSL3Q9P2N6 904 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 PHTF1Q9UMS5 762 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 V9GY48 417 aaPredicted RBP7.1□□□□□ -1.27
SMG1-217ENST00000569764 DUOX1Q9NRD9 1551 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 COL11A2P13942 1736 aaPredicted RBP7.1□□□□□ -1.27
SMG1-217ENST00000569764 NPPAP01160 153 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 EIF4BP23588 611 aaKnown RBP7.1□□□□□ -1.27
SMG1-217ENST00000569764 METAP2P50579 478 aaKnown RBP eCLIP7.1□□□□□ -1.27
SMG1-217ENST00000569764 ZNF445P59923 1031 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 KRT76Q01546 638 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 USH1GQ495M9 461 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 GLB1LQ6UWU2 654 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 TLK2Q86UE8 772 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 SEPT1Q8WYJ6 367 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 CALML4Q96GE6 196 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 SPATA33Q96N06 139 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 C7orf25Q9BPX7 421 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 MOV10L1Q9BXT6 1211 aaKnown RBP7.1□□□□□ -1.27
SMG1-217ENST00000569764 PSTPIP2Q9H939 334 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 METTL5Q9NRN9 209 aaKnown RBP7.1□□□□□ -1.27
SMG1-217ENST00000569764 SQORQ9Y6N5 450 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 KIAA1551Q9HCM1 1747 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 JAK3P52333 1124 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 TUBA1BP68363 451 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 PPARDQ03181 441 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 TLE2Q04725 743 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 ALX1Q15699 326 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 TEX35Q5T0J7 233 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 ARHGAP11AQ6P4F7 1023 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 MICALCLQ6ZW33 695 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 TUBA1AQ71U36 451 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 SH3BP5LQ7L8J4 393 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 VSIG1Q86XK7 387 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 SHDQ96IW2 340 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 TSGA13Q96PP4 275 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 TEKT3Q9BXF9 490 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 FBRSQ9HAH7 460 aa7.1□□□□□ -1.27
SMG1-217ENST00000569764 TNS1Q9HBL0 1735 aaKnown RBP7.09□□□□□ -1.27
SMG1-217ENST00000569764 ZBTB39O15060 712 aa7.09□□□□□ -1.27
SMG1-217ENST00000569764 ATP5DP30049 168 aa7.09□□□□□ -1.27
SMG1-217ENST00000569764 SFNP31947 248 aa7.09□□□□□ -1.27
SMG1-217ENST00000569764 SP4Q02446 784 aa7.09□□□□□ -1.27
SMG1-217ENST00000569764 ZBTB16Q05516 673 aa7.09□□□□□ -1.27
SMG1-217ENST00000569764 EFR3AQ14156 821 aa7.09□□□□□ -1.27
SMG1-217ENST00000569764 CEP97Q8IW35 865 aa7.09□□□□□ -1.27
SMG1-217ENST00000569764 THNSL1Q8IYQ7 743 aa7.09□□□□□ -1.27
SMG1-217ENST00000569764 CHCHD6Q9BRQ6 235 aa7.09□□□□□ -1.27
SMG1-217ENST00000569764 BRD8Q9H0E9 1235 aa7.09□□□□□ -1.27
SMG1-217ENST00000569764 CYP4F11Q9HBI6 524 aa7.09□□□□□ -1.27
SMG1-217ENST00000569764 PTBP2Q9UKA9 531 aaKnown RBP7.09□□□□□ -1.27
SMG1-217ENST00000569764 CCDC88AQ3V6T2 1871 aa7.09□□□□□ -1.27
SMG1-217ENST00000569764 EIF4E1BA6NMX2 242 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms