RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, human

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40C-211	ENST00000568586	PDCD11	Q14690	1871 aa	Known RBP	32.02	■■■□□ 2.72
RAB40C-211	ENST00000568586	SPDYE4	A6NLX3	237 aa		32.02	■■■□□ 2.72
RAB40C-211	ENST00000568586	RFPL2	O75678	378 aa		32.02	■■■□□ 2.72
RAB40C-211	ENST00000568586	CYP3A5	P20815	502 aa		32.02	■■■□□ 2.72
RAB40C-211	ENST00000568586	LRPAP1	P30533	357 aa		32.02	■■■□□ 2.72
RAB40C-211	ENST00000568586	BRCC3	P46736	316 aa		32.02	■■■□□ 2.72
RAB40C-211	ENST00000568586	PKP1	Q13835	747 aa		32.02	■■■□□ 2.72
RAB40C-211	ENST00000568586	PTPN21	Q16825	1174 aa		32.02	■■■□□ 2.72
RAB40C-211	ENST00000568586	ZBTB41	Q5SVQ8	909 aa		32.02	■■■□□ 2.72
RAB40C-211	ENST00000568586	ANKS3	Q6ZW76	656 aa		32.02	■■■□□ 2.72
RAB40C-211	ENST00000568586	PLCD3	Q8N3E9	789 aa		32.02	■■■□□ 2.72
RAB40C-211	ENST00000568586	CPSF3	Q9UKF6	684 aa	Known RBP	32.02	■■■□□ 2.72
RAB40C-211	ENST00000568586	ANKRD63	C9JTQ0	380 aa		32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	SYN3	O14994	580 aa		32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	ADAM12	O43184	909 aa		32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	ZMYND10	O75800	440 aa		32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	TKT	P29401	623 aa	Known RBP	32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	POU5F1	Q01860	360 aa	Known RBP	32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	FOXD4L5	Q5VV16	416 aa	Predicted RBP	32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	SLFN12L	Q6IEE8	588 aa		32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	SHC4	Q6S5L8	630 aa		32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	GLYCTK	Q8IVS8	523 aa		32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	CD302	Q8IX05	232 aa		32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	KCNG4	Q8TDN1	519 aa		32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	MSTO1	Q9BUK6	570 aa		32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	CUEDC2	Q9H467	287 aa		32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	WDR6	Q9NNW5	1121 aa	Known RBP	32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	TSHZ2	Q9NRE2	1034 aa		32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	KBTBD4	Q9NVX7	518 aa		32.01	■■■□□ 2.71
RAB40C-211	ENST00000568586	LACTBL1	A8MY62	500 aa		32	■■■□□ 2.71
RAB40C-211	ENST00000568586	CCDC149	Q6ZUS6	474 aa		32	■■■□□ 2.71
RAB40C-211	ENST00000568586	PDILT	Q8N807	584 aa		32	■■■□□ 2.71
RAB40C-211	ENST00000568586	SUSD3	Q96L08	255 aa		32	■■■□□ 2.71
RAB40C-211	ENST00000568586	PRKD2	Q9BZL6	878 aa		32	■■■□□ 2.71
RAB40C-211	ENST00000568586	TNMD	Q9H2S6	317 aa		32	■■■□□ 2.71
RAB40C-211	ENST00000568586	RPF1	Q9H9Y2	349 aa	Known RBP	32	■■■□□ 2.71
RAB40C-211	ENST00000568586	TUBGCP4	Q9UGJ1	667 aa		32	■■■□□ 2.71
RAB40C-211	ENST00000568586	UBQLN1	Q9UMX0	589 aa	Known RBP	32	■■■□□ 2.71
RAB40C-211	ENST00000568586	C2orf16	Q68DN1	1984 aa		31.99	■■■□□ 2.71
RAB40C-211	ENST00000568586		I3L4J1	428 aa		31.99	■■■□□ 2.71
RAB40C-211	ENST00000568586	TBC1D4	O60343	1298 aa		31.99	■■■□□ 2.71
RAB40C-211	ENST00000568586	SP100	P23497	879 aa	Predicted RBP	31.99	■■■□□ 2.71
RAB40C-211	ENST00000568586	PPP2R3A	Q06190	1150 aa		31.99	■■■□□ 2.71
RAB40C-211	ENST00000568586	MRPL58	Q14197	206 aa	Known RBP	31.99	■■■□□ 2.71
RAB40C-211	ENST00000568586	RSPO2	Q6UXX9	243 aa	Predicted RBP	31.99	■■■□□ 2.71
RAB40C-211	ENST00000568586	TRIM67	Q6ZTA4	783 aa		31.99	■■■□□ 2.71
RAB40C-211	ENST00000568586	RTL10	Q7L3V2	364 aa		31.99	■■■□□ 2.71
RAB40C-211	ENST00000568586	OTOP3	Q7RTS5	596 aa		31.99	■■■□□ 2.71
RAB40C-211	ENST00000568586	TDRD5	Q8NAT2	981 aa	Known RBP	31.99	■■■□□ 2.71
RAB40C-211	ENST00000568586	MRPL44	Q9H9J2	332 aa	Known RBP	31.99	■■■□□ 2.71
RAB40C-211	ENST00000568586	OR1D2	P34982	312 aa		31.98	■■■□□ 2.71
RAB40C-211	ENST00000568586	SLC8B1	Q6J4K2	584 aa		31.98	■■■□□ 2.71
RAB40C-211	ENST00000568586	CNNM4	Q6P4Q7	775 aa		31.98	■■■□□ 2.71
RAB40C-211	ENST00000568586	BMP8A	Q7Z5Y6	402 aa		31.98	■■■□□ 2.71
RAB40C-211	ENST00000568586	SMG7	Q92540	1137 aa	Known RBP	31.98	■■■□□ 2.71
RAB40C-211	ENST00000568586	TISP43	B9A030	160 aa		31.97	■■■□□ 2.71
RAB40C-211	ENST00000568586	HNRNPA1	P09651	372 aa	Known RBP eCLIP	31.97	■■■□□ 2.71
RAB40C-211	ENST00000568586	ADSS	P30520	456 aa		31.97	■■■□□ 2.71
RAB40C-211	ENST00000568586	HOXA9	P31269	272 aa		31.97	■■■□□ 2.71
RAB40C-211	ENST00000568586	ALCAM	Q13740	583 aa		31.97	■■■□□ 2.71
RAB40C-211	ENST00000568586	L1TD1	Q5T7N2	865 aa	Known RBP	31.97	■■■□□ 2.71
RAB40C-211	ENST00000568586	KIF12	Q96FN5	646 aa		31.97	■■■□□ 2.71
RAB40C-211	ENST00000568586	LRRC27	Q9C0I9	530 aa		31.97	■■■□□ 2.71
RAB40C-211	ENST00000568586	RCOR1	Q9UKL0	485 aa		31.97	■■■□□ 2.71
RAB40C-211	ENST00000568586	CFAP45	Q9UL16	551 aa		31.97	■■■□□ 2.71
RAB40C-211	ENST00000568586	ARIH1	Q9Y4X5	557 aa	Predicted RBP	31.97	■■■□□ 2.71
RAB40C-211	ENST00000568586	NUB1	Q9Y5A7	615 aa		31.97	■■■□□ 2.71
RAB40C-211	ENST00000568586	PCDHB13	Q9Y5F0	798 aa		31.97	■■■□□ 2.71
RAB40C-211	ENST00000568586	POU2F2	P09086	479 aa		31.96	■■■□□ 2.71
RAB40C-211	ENST00000568586	AARS	P49588	968 aa	Known RBP eCLIP	31.96	■■■□□ 2.71	3e-8	■■■■■ 29.1
RAB40C-211	ENST00000568586	SPAG1	Q07617	926 aa		31.96	■■■□□ 2.71
RAB40C-211	ENST00000568586	KCNA1	Q09470	495 aa		31.96	■■■□□ 2.71
RAB40C-211	ENST00000568586	POSTN	Q15063	836 aa		31.96	■■■□□ 2.71
RAB40C-211	ENST00000568586	UVSSA	Q2YD98	709 aa		31.96	■■■□□ 2.71
RAB40C-211	ENST00000568586	VARS2	Q5ST30	1063 aa	Known RBP	31.96	■■■□□ 2.71
RAB40C-211	ENST00000568586	ADAL	Q6DHV7	355 aa		31.96	■■■□□ 2.71
RAB40C-211	ENST00000568586	IQUB	Q8NA54	791 aa		31.96	■■■□□ 2.71
RAB40C-211	ENST00000568586	SPRYD3	Q8NCJ5	442 aa		31.96	■■■□□ 2.71
RAB40C-211	ENST00000568586	ACSF2	Q96CM8	615 aa	Predicted RBP	31.96	■■■□□ 2.71
RAB40C-211	ENST00000568586	PANK4	Q9NVE7	773 aa		31.96	■■■□□ 2.71
RAB40C-211	ENST00000568586	AGO2	Q9UKV8	859 aa	Known RBP	31.96	■■■□□ 2.71
RAB40C-211	ENST00000568586	DERA	Q9Y315	318 aa		31.96	■■■□□ 2.71
RAB40C-211	ENST00000568586	CDY1	Q9Y6F8	540 aa		31.96	■■■□□ 2.71
RAB40C-211	ENST00000568586	XPOT	O43592	962 aa	Known RBP	31.95	■■■□□ 2.71
RAB40C-211	ENST00000568586	MYB	P10242	640 aa		31.95	■■■□□ 2.71
RAB40C-211	ENST00000568586	IDE	P14735	1019 aa		31.95	■■■□□ 2.71
RAB40C-211	ENST00000568586	SIGLEC14	Q08ET2	396 aa		31.95	■■■□□ 2.71
RAB40C-211	ENST00000568586	SPATA1	Q5VX52	437 aa		31.95	■■■□□ 2.71
RAB40C-211	ENST00000568586	ACCS	Q96QU6	501 aa		31.95	■■■□□ 2.71
RAB40C-211	ENST00000568586	IKZF4	Q9H2S9	585 aa		31.95	■■■□□ 2.71
RAB40C-211	ENST00000568586	ASB7	Q9H672	318 aa		31.95	■■■□□ 2.71
RAB40C-211	ENST00000568586	PCDHA7	Q9UN72	937 aa		31.95	■■■□□ 2.71
RAB40C-211	ENST00000568586	EXOC7	Q9UPT5	735 aa		31.95	■■■□□ 2.71
RAB40C-211	ENST00000568586	SORCS3	Q9UPU3	1222 aa		31.95	■■■□□ 2.71
RAB40C-211	ENST00000568586	CLUH	O75153	1309 aa		31.95	■■■□□ 2.7
RAB40C-211	ENST00000568586	MYO10	Q9HD67	2058 aa		31.95	■■■□□ 2.7
RAB40C-211	ENST00000568586		M0QZQ0	153 aa		31.94	■■■□□ 2.7
RAB40C-211	ENST00000568586	CASP5	P51878	434 aa		31.94	■■■□□ 2.7
RAB40C-211	ENST00000568586	HFE2	Q6ZVN8	426 aa		31.94	■■■□□ 2.7

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