RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 FAM205CA6NFA0 338 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 NEMFO60524 1076 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 FOXD2O60548 495 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 ATF2P15336 505 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 PSMC3P17980 439 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 IGFBP6P24592 240 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 GDI1P31150 447 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 KRT2P35908 639 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 NAMPTP43490 491 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 CXCL12P48061 93 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 SCRN1Q12765 414 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 NR5A1Q13285 461 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 SIM2Q14190 667 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 EEF1DP3Q658K8 133 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 PRR23CQ6ZRP0 262 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 MAP4K3Q8IVH8 894 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 C3orf58Q8NDZ4 430 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 DEPTORQ8TB45 409 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 DEPDC1BQ8WUY9 529 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 DDX1Q92499 740 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 SMARCD2Q92925 531 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 TCEAL4Q96EI5 215 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 CHAMP1Q96JM3 812 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 TM6SF1Q9BZW5 370 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 CCDC113Q9H0I3 377 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 CYP4F11Q9HBI6 524 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 NOTCH4Q99466 2003 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 CHD6Q8TD26 2715 aa12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 CNOT1A5YKK6 2376 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-209ENST00000568569 WDR27A2RRH5 827 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 I3L4J1 428 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 SYN3O14994 580 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 EPB41L2O43491 1005 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 ABLIM3O94929 683 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 LIG1P18858 919 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 CNR2P34972 360 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 CCR2P41597 374 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 TXKP42681 527 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 BRCC3P46736 316 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 SATB1Q01826 763 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 PPP2R5AQ15172 486 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 CSRP2Q16527 193 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 CYP4A22Q5TCH4 519 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 IQCEQ6IPM2 695 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 C1orf228Q6PIY5 440 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 CD300LGQ6UXG3 332 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 VITQ6UXI7 678 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 TCEAL8Q8IYN2 117 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 ELMOD1Q8N336 334 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 BSNDQ8WZ55 320 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 WASF1Q92558 559 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 TNFRSF25Q93038 417 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 MSANTD3Q96H12 275 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 GOLGA2P5Q9HBQ8 144 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 TUFT1Q9NNX1 390 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 USP20Q9Y2K6 914 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 INSL5Q9Y5Q6 135 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 VWA8A3KMH1 1905 aa12.98□□□□□ -0.33
GTF3C1-209ENST00000568569 ZNF263O14978 683 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 EDN1P05305 212 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 SPATA31C1P0DKV0 1188 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 CHRNB1P11230 501 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 EFNA5P52803 228 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 MLLT6P55198 1093 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 ARPP19P56211 112 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 LRRC32Q14392 662 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 ATF7IP2Q5U623 682 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 TPGS2Q68CL5 300 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 SPEM1Q8N4L4 309 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 LEMD2Q8NC56 503 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 MTMR9Q96QG7 549 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 NACC1Q96RE7 527 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 TOPORSQ9NS56 1045 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 PDRG1Q9NUG6 133 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 SLC38A7Q9NVC3 462 aa12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 ORC3Q9UBD5 711 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-209ENST00000568569 CHURC1-FNTBB4DL54 471 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 H7C4K7 107 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 ARNTLO00327 626 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 NRG2O14511 850 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 HRO43593 1189 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 PAPSS2O95340 614 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 CYP11B2P19099 503 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 KCNA4P22459 653 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 CCNE1P24864 410 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 FNTBP49356 437 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 YARSP54577 528 aaKnown RBP12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 PTGDRQ13258 359 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 GAS6Q14393 721 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 PADI6Q6TGC4 694 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 LONP2Q86WA8 852 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 CATSPER3Q86XQ3 398 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 ZSCAN18Q8TBC5 510 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 ZNF512Q96ME7 567 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 ZSWIM3Q96MP5 696 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 KIFC3Q9BVG8 833 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 TRPV4Q9HBA0 871 aa12.96□□□□□ -0.33
GTF3C1-209ENST00000568569 ASAH2Q9NR71 780 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms