RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 MFSD14AQ96MC6 490 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 FBXL18Q96ME1 805 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 NCAPGQ9BPX3 1015 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 JPH2Q9BR39 696 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-250ENST00000568290 TRIM31Q9BZY9 425 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 KIAA1683Q9H0B3 1180 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 FAM124BQ9H5Z6 455 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-250ENST00000568290 ATP6V0A4Q9HBG4 840 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 BATF3Q9NR55 127 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 HAUS2Q9NVX0 235 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 GEMIN8Q9NWZ8 242 aaKnown RBP8.14□□□□□ -1.11
ATXN3-250ENST00000568290 HCSTQ9UBK5 93 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 IP6K2Q9UHH9 426 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 ANAPC5Q9UJX4 755 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 STRIP2Q9ULQ0 834 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 SNX24Q9Y343 169 aa8.14□□□□□ -1.11
ATXN3-250ENST00000568290 ARFGEF1Q9Y6D6 1849 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 NKRFO15226 690 aaKnown RBP eCLIP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 EXTL3O43909 919 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 LSM8O95777 96 aaKnown RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 TTC4O95801 387 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 ARP10275 920 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 ITGA4P13612 1032 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 KRT5P13647 590 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 CHN1P15882 459 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 DRD4P21917 467 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 CALRP27797 417 aaKnown RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 STX2P32856 288 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 ADCY8P40145 1251 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 PTGIRP43119 386 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 LIG4P49917 911 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 PTPN5P54829 565 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 PEX3P56589 373 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 MRPS25P82663 173 aaKnown RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 ATP11AP98196 1134 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 MAP3K10Q02779 954 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 GRM1Q13255 1194 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 RASA2Q15283 850 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 SEPT7Q16181 437 aaKnown RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 EAPPQ56P03 285 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 ANKRD20A8PQ5CZ79 823 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 SPDYAQ5MJ70 313 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 TTC19Q6DKK2 380 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 GJB7Q6PEY0 223 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 DRICH1Q6PGQ1 229 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 SMIM5Q71RC9 77 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 SH3BP5LQ7L8J4 393 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 TRPM8Q7Z2W7 1104 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 DDX42Q86XP3 938 aaKnown RBP eCLIP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 KATNAL2Q8IYT4 538 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 TTC39CQ8N584 583 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 PRELID2Q8N945 189 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 BANK1Q8NDB2 785 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 EXD1Q8NHP7 514 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 FBXO25Q8TCJ0 367 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 NSUN6Q8TEA1 469 aaKnown RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 APBB2Q92870 758 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 ARHGEF2Q92974 986 aaKnown RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 CD101Q93033 1021 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 ALKBH8Q96BT7 664 aaKnown RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 TRIM51Q9BSJ1 452 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 FRMD8Q9BZ67 464 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 GPR88Q9GZN0 384 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 TMEM117Q9H0C3 514 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 CCDC113Q9H0I3 377 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 PLEKHA4Q9H4M7 779 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 QTRT2Q9H974 415 aaKnown RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 TXLNGQ9NUQ3 528 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 PARVAQ9NVD7 372 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 FETUBQ9UGM5 382 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 ANAPC7Q9UJX3 599 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 NOCTQ9UK39 431 aaKnown RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 RPL26L1Q9UNX3 145 aaKnown RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 EFR3BQ9Y2G0 817 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 ARL2BPQ9Y2Y0 163 aa8.13□□□□□ -1.11
ATXN3-250ENST00000568290 USP15Q9Y4E8 981 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-250ENST00000568290 A0A1W2PRG0 241 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 DENND3A2RUS2 1198 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 TMEM110-MUSTN1A8MSY1 372 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 TCP10L2B9ZVM9 353 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 HNRNPDLO14979 420 aaKnown RBP8.12□□□□□ -1.11
ATXN3-250ENST00000568290 MED7O43513 233 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 CAND2O75155 1236 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 RASSF9O75901 435 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 DCTN3O75935 186 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 PROSCO94903 275 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 RPS12P25398 132 aaKnown RBP8.12□□□□□ -1.11
ATXN3-250ENST00000568290 RFC5P40937 340 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 ECE1P42892 770 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 EFNA5P52803 228 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 SEC24CP53992 1094 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 SNX16P57768 344 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 KRT17Q04695 432 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 CYP24A1Q07973 514 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 KCNA1Q09470 495 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 CCDC15Q0P6D6 951 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 ACVR2BQ13705 512 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 PIGHQ14442 188 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-250ENST00000568290 PSMD6Q15008 389 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 HADHQ16836 314 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms