RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	CBX1	P83916	185 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	ITIH3	Q06033	890 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	SCN5A	Q14524	2016 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	C1orf53	Q5VUE5	145 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	MTHFD1L	Q6UB35	978 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	SV2A	Q7L0J3	742 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	USP37	Q86T82	979 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	SESTD1	Q86VW0	696 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	HELQ	Q8TDG4	1101 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	TAS1R2	Q8TE23	839 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	PSPC1	Q8WXF1	523 aa	Known RBP	10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	AGPAT1	Q99943	283 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	HTATIP2	Q9BUP3	242 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	OSBPL7	Q9BZF2	842 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	ARFGAP3	Q9NP61	516 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.91	□□□□□ -0.66	2e-6	■■■■■ 130.4
TCF4-231	ENST00000566279	TAS2R14	Q9NYV8	317 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	SMARCAL1	Q9NZC9	954 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	EHD2	Q9NZN4	543 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	PRDM4	Q9UKN5	801 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	PPME1	Q9Y570	386 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	LTBP2	Q14767	1821 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	ZNF233	A6NK53	670 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	C22orf31	O95567	290 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	TMEM253	P0C7T8	217 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	DLAT	P10515	647 aa	Known RBP	10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	TNFAIP3	P21580	790 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	CYP2C18	P33260	490 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	NOP2	P46087	812 aa	Known RBP	10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	CCL23	P55773	120 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	WNT7B	P56706	349 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	NLRP11	P59045	1033 aa	Known RBP	10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	CLDN10	P78369	228 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	PSMD6	Q15008	389 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	IFI16	Q16666	785 aa	Known RBP	10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	WDR93	Q6P2C0	686 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	C15orf39	Q6ZRI6	1047 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	FAM71A	Q8IYT1	594 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	METTL13	Q8N6R0	699 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	FBXL13	Q8NEE6	735 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	TPCN2	Q8NHX9	752 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	DNAJB3	Q8WWF6	145 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	SHC3	Q92529	594 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	SCLY	Q96I15	445 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	FAM84A	Q96KN4	292 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	TMEM134	Q9H6X4	195 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	SUGCT	Q9HAC7	445 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	KIAA1586	Q9HCI6	787 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	TMEM39A	Q9NV64	488 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	RNF216	Q9NWF9	866 aa	Predicted RBP	10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	MROH7	Q68CQ1	1323 aa		10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	LAMA2	P24043	3122 aa	Known RBP	10.91	□□□□□ -0.66
TCF4-231	ENST00000566279	TARSL2	A2RTX5	802 aa	Known RBP	10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	TMCO5B	A8MYB1	307 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279		K7ERI5	159 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	TULP1	O00294	542 aa	Predicted RBP	10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	KIAA0391	O15091	583 aa	Known RBP	10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	ATP8B1	O43520	1251 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	SASH3	O75995	380 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	TUBB	P07437	444 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	RGS19	P49795	217 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	MKRN4P	Q13434	485 aa	Predicted RBP	10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	LONRF2	Q1L5Z9	754 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	BEND6	Q5SZJ8	279 aa	Predicted RBP	10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	SLFN11	Q7Z7L1	901 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	SERINC5	Q86VE9	423 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	PPM1K	Q8N3J5	372 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	MMGT1	Q8N4V1	131 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	SPATA4	Q8NEY3	305 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	ZNF516	Q92618	1163 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	ZBTB45	Q96K62	511 aa	Predicted RBP	10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	NT5C1B	Q96P26	610 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	TARS2	Q9BW92	718 aa	Known RBP	10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	GOLPH3	Q9H4A6	298 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	RAB20	Q9NX57	234 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	NOCT	Q9UK39	431 aa	Known RBP	10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	AGO2	Q9UKV8	859 aa	Known RBP	10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	TANC1	Q9C0D5	1861 aa		10.9	□□□□□ -0.66
TCF4-231	ENST00000566279	IGKV6-21	A0A0C4DH24	114 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	MBLAC1	A4D2B0	266 aa	Predicted RBP	10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	TLR3	O15455	904 aa	Known RBP	10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	VTN	P04004	478 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	CAPN2	P17655	700 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	THPO	P40225	353 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	DNA2	P51530	1060 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	MFAP3	P55082	362 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	PTPN11	Q06124	597 aa	Predicted RBP	10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	PRPF4B	Q13523	1007 aa	Known RBP	10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	ZBTB41	Q5SVQ8	909 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	CCDC181	Q5TID7	509 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	SLFN12L	Q6IEE8	588 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	EFCAB12	Q6NXP0	572 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	KRT222	Q8N1A0	295 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	PRPF31	Q8WWY3	499 aa	Known RBP	10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	MS4A14	Q96JA4	679 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	TOX2	Q96NM4	488 aa		10.9	□□□□□ -0.67
TCF4-231	ENST00000566279	WNT8A	Q9H1J5	351 aa		10.9	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms