RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 USPL1Q5W0Q7 1092 aa11.22□□□□□ -0.61
SNX29-205ENST00000566228 SH3BP5LQ7L8J4 393 aa11.22□□□□□ -0.61
SNX29-205ENST00000566228 RIBC1Q8N443 379 aaPredicted RBP11.22□□□□□ -0.61
SNX29-205ENST00000566228 TIPINQ9BVW5 301 aa11.22□□□□□ -0.61
SNX29-205ENST00000566228 THRAP3Q9Y2W1 955 aaKnown RBP11.22□□□□□ -0.61
SNX29-205ENST00000566228 SMCO3A2RU48 225 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 GMNCA6NCL1 334 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 E7EWF7 191 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 ATP5JP18859 108 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 LINC00523Q86TU6 105 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 RIN3Q8TB24 985 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 ATP8B4Q8TF62 1192 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 VPS33BQ9H267 617 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 ANAPC2Q9UJX6 822 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 RPAP1Q9BWH6 1393 aaPredicted RBP11.21□□□□□ -0.61
SNX29-205ENST00000566228 MRPS35P82673 323 aaKnown RBP11.21□□□□□ -0.61
SNX29-205ENST00000566228 TTLL4Q14679 1199 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 ZNF790Q6PG37 636 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 INPP5DQ92835 1189 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 GCLCP48506 637 aaPredicted RBP11.21□□□□□ -0.61
SNX29-205ENST00000566228 BCAR1P56945 870 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 TERF2Q15554 542 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 Q3C1V9 767 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 ARHGAP27Q6ZUM4 889 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 UHMK1Q8TAS1 419 aaKnown RBP11.21□□□□□ -0.61
SNX29-205ENST00000566228 TGS1Q96RS0 853 aaKnown RBP11.21□□□□□ -0.61
SNX29-205ENST00000566228 PARVAQ9NVD7 372 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 HOXC10Q9NYD6 342 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 WDR35Q9P2L0 1181 aa11.21□□□□□ -0.61
SNX29-205ENST00000566228 MAGED2Q9UNF1 606 aaPredicted RBP11.21□□□□□ -0.61
SNX29-205ENST00000566228 MYO1GB0I1T2 1018 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 IL12RB1P42701 662 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 SLC1A1P43005 524 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 CTSWP56202 376 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 RABGAP1LQ5R372 815 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 MACC1Q6ZN28 852 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 CDH24Q86UP0 819 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 C2orf69Q8N8R5 385 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 C3orf20Q8ND61 904 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 MAGED4Q96JG8 741 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 MRPL39Q9NYK5 338 aaKnown RBP11.21□□□□□ -0.62
SNX29-205ENST00000566228 SPASTQ9UBP0 616 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 KLHL3Q9UH77 587 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 RNF123Q5XPI4 1314 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 TRPC5OSA6NMA1 111 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 MGRN1O60291 552 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 STAT3P40763 770 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 POP5Q969H6 163 aaKnown RBP11.21□□□□□ -0.62
SNX29-205ENST00000566228 ECSITQ9BQ95 431 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 KATNAL1Q9BW62 490 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 CATSPERBQ9H7T0 1116 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 NOVA2Q9UNW9 492 aaKnown RBP11.21□□□□□ -0.62
SNX29-205ENST00000566228 HEY1Q9Y5J3 304 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 ASNSP08243 561 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 PDHA1P08559 390 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 ERVK-10P10266 1014 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 AP3B2Q13367 1082 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 PGBD4Q96DM1 585 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 MRPL4Q9BYD3 311 aaKnown RBP11.21□□□□□ -0.62
SNX29-205ENST00000566228 C20orf96Q9NUD7 363 aaPredicted RBP11.21□□□□□ -0.62
SNX29-205ENST00000566228 STK39Q9UEW8 545 aa11.21□□□□□ -0.62
SNX29-205ENST00000566228 BMP3P12645 472 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 HDLBPQ00341 1268 aaKnown RBP11.2□□□□□ -0.62
SNX29-205ENST00000566228 ZNF618Q5T7W0 954 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 SLC10A4Q96EP9 437 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 C17orf80Q9BSJ5 609 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 EMILIN2Q9BXX0 1053 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 BCL2L14Q9BZR8 327 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 COMMD9Q9P000 198 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 PI4KBQ9UBF8 816 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 LNPEPQ9UIQ6 1025 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 XDHP47989 1333 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 MYO3BQ8WXR4 1341 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 ZNF500O60304 480 aaPredicted RBP11.2□□□□□ -0.62
SNX29-205ENST00000566228 PGM1P36871 562 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 KCNK10P57789 538 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 GTF2IP78347 998 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 CDO1Q16878 200 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 ZSCAN18Q8TBC5 510 aaPredicted RBP11.2□□□□□ -0.62
SNX29-205ENST00000566228 SEPT1Q8WYJ6 367 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 SLC9A2Q9UBY0 812 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 CDC40O60508 579 aaKnown RBP eCLIP11.2□□□□□ -0.62
SNX29-205ENST00000566228 PRKG1Q13976 671 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 TSNQ15631 228 aaKnown RBP11.2□□□□□ -0.62
SNX29-205ENST00000566228 ME3Q16798 604 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 PDZK1Q5T2W1 519 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 BRINP3Q76B58 766 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 SUGP1Q8IWZ8 645 aaKnown RBP11.2□□□□□ -0.62
SNX29-205ENST00000566228 RHOT1Q8IXI2 618 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 AGGF1Q8N302 714 aaeCLIP11.2□□□□□ -0.624e-9■■■■■ 67.3
SNX29-205ENST00000566228 TBC1D22BQ9NU19 505 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 AHSPQ9NZD4 102 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 AFF4Q9UHB7 1163 aaKnown RBP11.2□□□□□ -0.62
SNX29-205ENST00000566228 TBKBP1A7MCY6 615 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 EXTL3O43909 919 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 CCNB2O95067 398 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 DLGAP3O95886 979 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 CAPN1P07384 714 aa11.2□□□□□ -0.62
SNX29-205ENST00000566228 SPATA2LQ8IUW3 424 aaPredicted RBP11.2□□□□□ -0.62
SNX29-205ENST00000566228 TRIT1Q9H3H1 467 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms