RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 TBX21Q9UL17 535 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 HTTP42858 3142 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 ABHD14A-ACY1A0A1B0GW23 586 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 TTLL13PA6NNM8 815 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 LACTBL1A8MY62 500 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 EIF3CLB5ME19 914 aaKnown RBP10.58□□□□□ -0.72
SF3B3-207ENST00000566095 RECQL4O94761 1208 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 BAIAP3O94812 1187 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 IPO7O95373 1038 aaKnown RBP10.58□□□□□ -0.72
SF3B3-207ENST00000566095 CXCL10P02778 98 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 TNFSF9P41273 254 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 PRKCIP41743 596 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 KCNMA1Q12791 1236 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 LRMPQ12912 555 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 NCOA4Q13772 614 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 TUBB2AQ13885 445 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 DSC3Q14574 896 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 LRRC26Q2I0M4 334 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 SLC10A6Q3KNW5 377 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 UBXN11Q5T124 520 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 E4F1Q66K89 784 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-207ENST00000566095 JADE1Q6IE81 842 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 TRIM65Q6PJ69 517 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 TRAF7Q6Q0C0 670 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 VPS36Q86VN1 386 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 CDR2LQ86X02 465 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-207ENST00000566095 ECHDC2Q86YB7 292 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 CALR3Q96L12 384 aaKnown RBP10.58□□□□□ -0.72
SF3B3-207ENST00000566095 UROC1Q96N76 676 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 EIF3CQ99613 913 aaKnown RBP10.58□□□□□ -0.72
SF3B3-207ENST00000566095 TUBB2BQ9BVA1 445 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 APOL6Q9BWW8 343 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 EIF2AQ9BY44 585 aaKnown RBP10.58□□□□□ -0.72
SF3B3-207ENST00000566095 MRPL9Q9BYD2 267 aaKnown RBP10.58□□□□□ -0.72
SF3B3-207ENST00000566095 PPP1R12CQ9BZL4 782 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 HAPLN2Q9GZV7 340 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 NXF3Q9H4D5 531 aaKnown RBP10.58□□□□□ -0.72
SF3B3-207ENST00000566095 AGO3Q9H9G7 860 aaKnown RBP10.58□□□□□ -0.72
SF3B3-207ENST00000566095 PRDM5Q9NQX1 630 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-207ENST00000566095 FAM207AQ9NSI2 230 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-207ENST00000566095 TMEM161AQ9NX61 479 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 PCDHB7Q9Y5E2 793 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 KIAA0100Q14667 2235 aaKnown RBP10.58□□□□□ -0.72
SF3B3-207ENST00000566095 UMODL1Q5DID0 1318 aa10.58□□□□□ -0.72
SF3B3-207ENST00000566095 RBAK-RBAKDNI3L0D1 243 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 STAU1O95793 577 aaKnown RBP10.57□□□□□ -0.72
SF3B3-207ENST00000566095 HLA-DRAP01903 254 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 AMHP03971 560 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 C4BPAP04003 597 aaKnown RBP10.57□□□□□ -0.72
SF3B3-207ENST00000566095 THP07101 528 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 KRT19P08727 400 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 UCHL3P15374 230 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 PON1P27169 355 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 STAT1P42224 750 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 ADKP55263 362 aaKnown RBP10.57□□□□□ -0.72
SF3B3-207ENST00000566095 TNNC1P63316 161 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 DLG4P78352 724 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 GCNT1Q02742 428 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 PPP3CAQ08209 521 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 GRIK3Q13003 919 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 CBWD6Q4V339 395 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 EPC2Q52LR7 807 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 XKR4Q5GH76 650 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 CBWD3Q5JTY5 395 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 CBWD5Q5RIA9 395 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 KLHDC7AQ5VTJ3 777 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 MFSD5Q6N075 450 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 TRAPPC11Q7Z392 1133 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 NPAS4Q8IUM7 802 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 LRRC52Q8N7C0 313 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 CEP120Q8N960 986 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 BAP1Q92560 729 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 DDX27Q96GQ7 796 aaKnown RBP10.57□□□□□ -0.72
SF3B3-207ENST00000566095 FAM193BQ96PV7 902 aaPredicted RBP10.57□□□□□ -0.72
SF3B3-207ENST00000566095 CRACR2AQ9BSW2 395 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 MTMR12Q9C0I1 747 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 HAUS4Q9H6D7 363 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 DPP3Q9NY33 737 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 PYCARDQ9ULZ3 195 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 RALGAPA2Q2PPJ7 1873 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 TANC1Q9C0D5 1861 aa10.57□□□□□ -0.72
SF3B3-207ENST00000566095 C9IYK1 514 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 EVI5O60447 810 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 NBNO60934 754 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 FERP16591 822 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 EN2P19622 333 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-207ENST00000566095 RPL9P32969 192 aaKnown RBP10.56□□□□□ -0.72
SF3B3-207ENST00000566095 CYP2C18P33260 490 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 CCL23P55773 120 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 BPIFB4P59827 614 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 POLR2FP61218 127 aaKnown RBP10.56□□□□□ -0.72
SF3B3-207ENST00000566095 TUBB4BP68371 445 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 RAPGEF1Q13905 1077 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 PTPN14Q15678 1187 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 ZNF699Q32M78 642 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 SV2CQ496J9 727 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 SEZ6Q53EL9 994 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 ZNF667Q5HYK9 610 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 ZBTB41Q5SVQ8 909 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 SFMBT2Q5VUG0 894 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms