RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 E2F7Q96AV8 911 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 DACT3Q96B18 629 aaPredicted RBP5.16□□□□□ -1.58
LINC00561-201ENST00000565815 HIST1H2AHQ96KK5 128 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 HIST1H2AJQ99878 128 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 STAP2Q9UGK3 403 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 PCDHGB6Q9Y5F9 930 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 LTN1O94822 1766 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 UBR3Q6ZT12 1888 aa5.15□□□□□ -1.58
LINC00561-201ENST00000565815 AKR1B10O60218 316 aa5.15□□□□□ -1.58
LINC00561-201ENST00000565815 TOX4O94842 621 aa5.15□□□□□ -1.58
LINC00561-201ENST00000565815 TMF1P82094 1093 aa5.15□□□□□ -1.58
LINC00561-201ENST00000565815 EIF4HQ15056 248 aaKnown RBP5.15□□□□□ -1.58
LINC00561-201ENST00000565815 SYCP2LQ5T4T6 812 aa5.15□□□□□ -1.58
LINC00561-201ENST00000565815 OVCH2Q7RTZ1 564 aa5.15□□□□□ -1.58
LINC00561-201ENST00000565815 ZNF761Q86XN6 746 aaPredicted RBP5.15□□□□□ -1.58
LINC00561-201ENST00000565815 TXNDC5Q8NBS9 432 aaKnown RBP5.15□□□□□ -1.58
LINC00561-201ENST00000565815 ARMT1Q9H993 441 aa5.15□□□□□ -1.58
LINC00561-201ENST00000565815 RUVBL1Q9Y265 456 aaKnown RBP5.15□□□□□ -1.58
LINC00561-201ENST00000565815 GLTPD2A6NH11 291 aa5.15□□□□□ -1.59
LINC00561-201ENST00000565815 PCSK1P29120 753 aa5.15□□□□□ -1.59
LINC00561-201ENST00000565815 ATP2C1P98194 919 aaPredicted RBP5.15□□□□□ -1.59
LINC00561-201ENST00000565815 UBE3CQ15386 1083 aa5.15□□□□□ -1.59
LINC00561-201ENST00000565815 KSR2Q6VAB6 950 aa5.15□□□□□ -1.59
LINC00561-201ENST00000565815 CAMKK1Q8N5S9 505 aa5.15□□□□□ -1.59
LINC00561-201ENST00000565815 WDR48Q8TAF3 677 aa5.15□□□□□ -1.59
LINC00561-201ENST00000565815 PARD3BQ8TEW8 1205 aa5.15□□□□□ -1.59
LINC00561-201ENST00000565815 MBD6Q96DN6 1003 aa5.15□□□□□ -1.59
LINC00561-201ENST00000565815 RPL10LQ96L21 214 aaKnown RBP5.15□□□□□ -1.59
LINC00561-201ENST00000565815 MYOCQ99972 504 aa5.15□□□□□ -1.59
LINC00561-201ENST00000565815 VRK1Q99986 396 aaPredicted RBP5.15□□□□□ -1.59
LINC00561-201ENST00000565815 KATNBL1Q9H079 304 aa5.15□□□□□ -1.59
LINC00561-201ENST00000565815 RNF114Q9Y508 228 aa5.15□□□□□ -1.59
LINC00561-201ENST00000565815 KDM6AO15550 1401 aaPredicted RBP5.15□□□□□ -1.59
LINC00561-201ENST00000565815 KIAA1551Q9HCM1 1747 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 A0A1W2PR48 441 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 MATN2O00339 956 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 MYL3P08590 195 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 AFF3P51826 1226 aaKnown RBP5.14□□□□□ -1.59
LINC00561-201ENST00000565815 MAP2K1Q02750 393 aaPredicted RBP5.14□□□□□ -1.59
LINC00561-201ENST00000565815 ANKRD53Q8N9V6 530 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 ADAMTS17Q8TE56 1095 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 DPYSL5Q9BPU6 564 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 C4AP0C0L4 1744 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 TCERG1O14776 1098 aaKnown RBP5.14□□□□□ -1.59
LINC00561-201ENST00000565815 CYP1A1P04798 512 aaPredicted RBP5.14□□□□□ -1.59
LINC00561-201ENST00000565815 MED14OSP0DP75 135 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 ZNF280AP59817 542 aaPredicted RBP5.14□□□□□ -1.59
LINC00561-201ENST00000565815 KRT85P78386 507 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 TARDBPQ13148 414 aaKnown RBP eCLIP5.14□□□□□ -1.59
LINC00561-201ENST00000565815 ATAT1Q5SQI0 421 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 PPP1R14CQ8TAE6 165 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 HPS3Q969F9 1004 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 RAX2Q96IS3 184 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 RNF181Q9P0P0 153 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 SPEF1Q9Y4P9 236 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 CNTNAP1P78357 1384 aa5.14□□□□□ -1.59
LINC00561-201ENST00000565815 APAF1O14727 1248 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 CA12O43570 354 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 PRC1O43663 620 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 CSF2RBP32927 897 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 CASRP41180 1078 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 NFATC3Q12968 1075 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 FAM214AQ32MH5 1076 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 PGS1Q32NB8 556 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 TRIM68Q6AZZ1 485 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 USP45Q70EL2 814 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 CARFQ8N187 725 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 MDM1Q8TC05 714 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 RUNDC1Q96C34 613 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 DMRTA2Q96SC8 542 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 NTMQ9P121 344 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 SAE1Q9UBE0 346 aaPredicted RBP5.13□□□□□ -1.59
LINC00561-201ENST00000565815 MYBBP1AQ9BQG0 1328 aaKnown RBP5.13□□□□□ -1.59
LINC00561-201ENST00000565815 KCPQ6ZWJ8 1503 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 TCAF2A6NFQ2 919 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 B4GALT3O60512 393 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 AMY1AP04745 511 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 HSP90AB1P08238 724 aaKnown RBP5.13□□□□□ -1.59
LINC00561-201ENST00000565815 MMP10P09238 476 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 AMPHP49418 695 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 SLC5A3P53794 718 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 ADKP55263 362 aaKnown RBP5.13□□□□□ -1.59
LINC00561-201ENST00000565815 RBM10P98175 930 aaKnown RBP5.13□□□□□ -1.59
LINC00561-201ENST00000565815 MST1LQ2TV78 715 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 IL31Q6EBC2 164 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 GLB1L2Q8IW92 636 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 RTKN2Q8IZC4 609 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 FAM9BQ8IZU0 186 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 SH2D3CQ8N5H7 860 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 TTLL6Q8N841 843 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 DCBLD1Q8N8Z6 715 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 FAM156AQ8NDB6 213 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 GCC1Q96CN9 775 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 CEP95Q96GE4 821 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 B3GNT5Q9BYG0 378 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 NGRNQ9NPE2 291 aaKnown RBP5.13□□□□□ -1.59
LINC00561-201ENST00000565815 FAM53CQ9NYF3 392 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 FNIP2Q9P278 1114 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 NR2E3Q9Y5X4 410 aa5.13□□□□□ -1.59
LINC00561-201ENST00000565815 DUSP10Q9Y6W6 482 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms