RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 FAM81BQ96LP2 452 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 ACAP3Q96P50 834 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 PLEKHA5Q9HAU0 1116 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 PIN4Q9Y237 131 aaKnown RBP20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 SLC4A7Q9Y6M7 1214 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 CITO14578 2027 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 ZBBXA8MT70 800 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 EPHB6O15197 1021 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 ARHGAP6O43182 974 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 NPTXRO95502 500 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 CTSHP09668 335 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 CDK17Q00537 523 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 DUOXA2Q1HG44 320 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 PDXDC1Q6P996 788 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 BAP1Q92560 729 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 ZNF516Q92618 1163 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 TSPAN18Q96SJ8 248 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 TSPYL2Q9H2G4 693 aaPredicted RBP20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 RAB20Q9NX57 234 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 APEX2Q9UBZ4 518 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 PLAGL2Q9UPG8 496 aa20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 YBX2Q9Y2T7 364 aaKnown RBP20.6■□□□□ 0.89
CSPG4P13-201ENST00000565545 RALGAPA2Q2PPJ7 1873 aa20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 ACTN1P12814 892 aa20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 MSNP26038 577 aaKnown RBP20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 RABGGTBP53611 331 aa20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 WNT7BP56706 349 aa20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 OSTNP61366 133 aa20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 MEA1Q16626 185 aa20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 FBXO47Q5MNV8 452 aa20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 CYP26C1Q6V0L0 522 aa20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 TMEM139Q8IV31 216 aa20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 CEP120Q8N960 986 aa20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 ADAMTS19Q8TE59 1207 aa20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 TRIM6Q9C030 488 aaPredicted RBP20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 TOPORSQ9NS56 1045 aaPredicted RBP20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 ST3GAL5Q9UNP4 418 aa20.59■□□□□ 0.89
CSPG4P13-201ENST00000565545 MYO9BQ13459 2157 aa20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 CXCL8P10145 99 aa20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 COL9A1P20849 921 aa20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 YARSP54577 528 aaKnown RBP20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 BFSP2Q13515 415 aa20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 PPP2R2DQ66LE6 453 aa20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 SMYD5Q6GMV2 418 aa20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 RRAGAQ7L523 313 aa20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 FAM212AQ96EL1 285 aa20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 SCLYQ96I15 445 aa20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 ANKRD36BP1Q96IX9 119 aa20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 STK33Q9BYT3 514 aa20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 WNT8AQ9H1J5 351 aa20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 NLRC4Q9NPP4 1024 aa20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 DERAQ9Y315 318 aa20.58■□□□□ 0.89
CSPG4P13-201ENST00000565545 LACTBL1A8MY62 500 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 ESPNB1AK53 854 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 TULP1O00294 542 aaPredicted RBP20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 TNNC2P02585 160 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 CKBP12277 381 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 BIRC3Q13489 604 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 SLC10A6Q3KNW5 377 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 ZNF618Q5T7W0 954 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 SFMBT2Q5VUG0 894 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 TDRD10Q5VZ19 366 aaKnown RBP20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 IQCEQ6IPM2 695 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 MICALL1Q8N3F8 863 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 TAS1R2Q8TE23 839 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 NT5C1BQ96P26 610 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 SPAG5Q96R06 1193 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 EIF2AQ9BY44 585 aaKnown RBP20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 ERVK-5Q9HDB9 667 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 AIPL1Q9NZN9 384 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 DNAJC12Q9UKB3 198 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 C2CD2Q9Y426 696 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 FHOD1Q9Y613 1164 aa20.57■□□□□ 0.88
CSPG4P13-201ENST00000565545 LRRC53A6NM62 1247 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 PHACTR2O75167 634 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 HLA-DRAP01903 254 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 TMEM191BP0C7N4 346 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 MYOGP15173 224 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 ZSCAN20P17040 1043 aaPredicted RBP20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 JAM2P57087 298 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 PAK2Q13177 524 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 LPIN1Q14693 890 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 WDR44Q5JSH3 913 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 UBXN11Q5T124 520 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 TWF2Q6IBS0 349 aaKnown RBP20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 ENOSF1Q7L5Y1 443 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 TMEM192Q8IY95 271 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 HACE1Q8IYU2 909 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 KIAA1524Q8TCG1 905 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 SEMA4DQ92854 862 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 UHRF1Q96T88 793 aaPredicted RBP20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 TRAIPQ9BWF2 469 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 PCDHA11Q9Y5I1 949 aa20.56■□□□□ 0.88
CSPG4P13-201ENST00000565545 PTPRJQ12913 1337 aa20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 CCDC172P0C7W6 258 aa20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 ATP2A2P16615 1042 aaKnown RBP20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 PIK3CAP42336 1068 aa20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 APBA1Q02410 837 aa20.55■□□□□ 0.88
CSPG4P13-201ENST00000565545 NFX1Q12986 1120 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms