RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 H0Y858 1186 aa13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 XPOTO43592 962 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 MICAL2O94851 1124 aa13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 CD2BP2O95400 341 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 ATF2P15336 505 aa13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 CYP3A5P20815 502 aa13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 TKTP29401 623 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 MARCKSP29966 332 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 SOX4Q06945 474 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 SLC10A6Q3KNW5 377 aa13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 VARS2Q5ST30 1063 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 HAUS6Q7Z4H7 955 aa13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 C3orf58Q8NDZ4 430 aa13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 RSAD2Q8WXG1 361 aa13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 SHDQ96IW2 340 aa13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 ZBTB45Q96K62 511 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 SUSD3Q96L08 255 aa13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 GOLGA2P5Q9HBQ8 144 aa13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 GDE1Q9NZC3 331 aa13.3□□□□□ -0.28
GTF3C1-204ENST00000564664 STK25O00506 426 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 CCL16O15467 120 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 NARSO43776 548 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 PIGRP01833 764 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 PTPN2P17706 415 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 LRPAP1P30533 357 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 DDIT3P35638 169 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 NBL1P41271 181 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 BRCC3P46736 316 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 ZNF131P52739 623 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 RAD51AP2Q09MP3 1159 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 CUL4AQ13619 759 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 PABPC1LQ4VXU2 614 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 CWF19L1Q69YN2 538 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 RSPO2Q6UXX9 243 aaPredicted RBP13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 CD302Q8IX05 232 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 CCDC105Q8IYK2 499 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 TCEAL8Q8IYN2 117 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 DTWD2Q8NBA8 298 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 FGF13Q92913 245 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 BICD1Q96G01 975 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 PHOX2BQ99453 314 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 PLIN2Q99541 437 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 CCSER1Q9C0I3 900 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 PARVGQ9HBI0 331 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 ANKFY1Q9P2R3 1169 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 DNMT3BQ9UBC3 853 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 TBX20Q9UMR3 447 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 POLIQ9UNA4 740 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 NUMBLQ9Y6R0 609 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 VWA8A3KMH1 1905 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 CITO14578 2027 aa13.29□□□□□ -0.28
GTF3C1-204ENST00000564664 PTPRZ1P23471 2315 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 TTC26A0AVF1 554 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 KRBA1A5PL33 1030 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 ZNF197O14709 1029 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 GFRA3O60609 400 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 FAM13AO94988 1023 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 LRG1P02750 347 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 ADRB2P07550 413 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 CFHP08603 1231 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 HARSP12081 509 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 RFX1P22670 979 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 IGFBP6P24592 240 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 MATR3P43243 847 aaKnown RBP eCLIP13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 LIG4P49917 911 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 PFKPQ01813 784 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 POU5F1Q01860 360 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 MAPK8IP2Q13387 824 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 ZBTB6Q15916 424 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 GPBP1Q86WP2 473 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 MYCT1Q8N699 235 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 RAD54LQ92698 747 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 C18orf25Q96B23 403 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 BLOC1S4Q9NUP1 217 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 AFF4Q9UHB7 1163 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 UBQLN1Q9UMX0 589 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 PCDHB8Q9UN66 801 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 ZFHX2Q9C0A1 2572 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 MYH11P35749 1972 aa13.28□□□□□ -0.28
GTF3C1-204ENST00000564664 NPHP3-ACAD11A0A0J9YXS1 232 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 I3L4J1 428 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 M0QZQ0 153 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 PRRG1O14668 218 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 OGTO15294 1046 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 PI15O43692 258 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 TRAK2O60296 914 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 OAZ2O95190 189 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 KRT18P05783 430 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 MCM4P33991 863 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 STARD6P59095 220 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 NTHL1P78549 312 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 ROR1Q01973 937 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 SF3A1Q15459 793 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 CTXN3Q4LDR2 81 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 SLFN12LQ6IEE8 588 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 ZNF280DQ6N043 979 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 PARM1Q6UWI2 310 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 ELMOD1Q8N336 334 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 LEMD2Q8NC56 503 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 RASSF8Q8NHQ8 419 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms