RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, human

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYLD-208	ENST00000564634	CACNA1A	O00555	2505 aa		27.61	■■■□□ 2.01
CYLD-208	ENST00000564634	ZMYND10	O75800	440 aa		27.61	■■■□□ 2.01
CYLD-208	ENST00000564634	EDN1	P05305	212 aa		27.61	■■■□□ 2.01
CYLD-208	ENST00000564634	SP9	P0CG40	484 aa		27.61	■■■□□ 2.01
CYLD-208	ENST00000564634	RTP2	Q5QGT7	225 aa		27.61	■■■□□ 2.01
CYLD-208	ENST00000564634	NT5DC1	Q5TFE4	455 aa		27.61	■■■□□ 2.01
CYLD-208	ENST00000564634	PAAF1	Q9BRP4	392 aa		27.61	■■■□□ 2.01
CYLD-208	ENST00000564634	RPP25	Q9BUL9	199 aa	Known RBP	27.61	■■■□□ 2.01
CYLD-208	ENST00000564634	DLGAP2	Q9P1A6	1054 aa		27.61	■■■□□ 2.01
CYLD-208	ENST00000564634	USP20	Q9Y2K6	914 aa		27.61	■■■□□ 2.01
CYLD-208	ENST00000564634		H0YCG3	227 aa		27.6	■■■□□ 2.01
CYLD-208	ENST00000564634	LRRN2	O75325	713 aa		27.6	■■■□□ 2.01
CYLD-208	ENST00000564634	TADA2A	O75478	443 aa		27.6	■■■□□ 2.01
CYLD-208	ENST00000564634	FAM13A	O94988	1023 aa		27.6	■■■□□ 2.01
CYLD-208	ENST00000564634	FSHR	P23945	695 aa		27.6	■■■□□ 2.01
CYLD-208	ENST00000564634	NTHL1	P78549	312 aa		27.6	■■■□□ 2.01
CYLD-208	ENST00000564634	CREM	Q03060	361 aa		27.6	■■■□□ 2.01
CYLD-208	ENST00000564634	ATF7IP2	Q5U623	682 aa		27.6	■■■□□ 2.01
CYLD-208	ENST00000564634	SV2B	Q7L1I2	683 aa		27.6	■■■□□ 2.01
CYLD-208	ENST00000564634	GRASP	Q7Z6J2	395 aa	Predicted RBP	27.6	■■■□□ 2.01
CYLD-208	ENST00000564634	TMEM161B	Q8NDZ6	487 aa		27.6	■■■□□ 2.01
CYLD-208	ENST00000564634	PANK2	Q9BZ23	570 aa		27.6	■■■□□ 2.01
CYLD-208	ENST00000564634	SLC2A4RG	Q9NR83	387 aa		27.6	■■■□□ 2.01
CYLD-208	ENST00000564634	TNFSF13B	Q9Y275	285 aa		27.6	■■■□□ 2.01
CYLD-208	ENST00000564634	GLUL	P15104	373 aa		27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	STAT6	P42226	847 aa		27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	ZNF131	P52739	623 aa		27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	HSP90AA2P	Q14568	343 aa	Predicted RBP	27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	DCAF4L1	Q3SXM0	396 aa		27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	ZC3H14	Q6PJT7	736 aa	Known RBP	27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	TAS1R3	Q7RTX0	852 aa		27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	C1orf210	Q8IVY1	113 aa		27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	PJA1	Q8NG27	643 aa		27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	FGF14	Q92915	247 aa		27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	ACO2	Q99798	780 aa	Known RBP	27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	MRPL4	Q9BYD3	311 aa	Known RBP	27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	PARVG	Q9HBI0	331 aa		27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	FBXW11	Q9UKB1	542 aa		27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	RCOR1	Q9UKL0	485 aa		27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	ATP6V1D	Q9Y5K8	247 aa		27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	SF3B1	O75533	1304 aa	Known RBP eCLIP	27.59	■■■□□ 2.01
CYLD-208	ENST00000564634	DOCK6	Q96HP0	2047 aa		27.58	■■■□□ 2.01
CYLD-208	ENST00000564634	CASTOR2	A6NHX0	329 aa		27.58	■■■□□ 2.01
CYLD-208	ENST00000564634	C1R	P00736	705 aa		27.58	■■■□□ 2.01
CYLD-208	ENST00000564634	STRN3	Q13033	797 aa		27.58	■■■□□ 2.01
CYLD-208	ENST00000564634	AXDND1	Q5T1B0	1012 aa	Predicted RBP	27.58	■■■□□ 2.01
CYLD-208	ENST00000564634	EEF1DP3	Q658K8	133 aa		27.58	■■■□□ 2.01
CYLD-208	ENST00000564634	PARM1	Q6UWI2	310 aa		27.58	■■■□□ 2.01
CYLD-208	ENST00000564634	GPR65	Q8IYL9	337 aa		27.58	■■■□□ 2.01
CYLD-208	ENST00000564634	MYCT1	Q8N699	235 aa		27.58	■■■□□ 2.01
CYLD-208	ENST00000564634	PCDHA7	Q9UN72	937 aa		27.58	■■■□□ 2.01
CYLD-208	ENST00000564634	ZMYM2	Q9UBW7	1377 aa		27.58	■■■□□ 2.01
CYLD-208	ENST00000564634		A0A087X0B3	334 aa		27.57	■■■□□ 2
CYLD-208	ENST00000564634	TBCA	O75347	108 aa	Known RBP	27.57	■■■□□ 2
CYLD-208	ENST00000564634	SCP2	P22307	547 aa		27.57	■■■□□ 2
CYLD-208	ENST00000564634	ME1	P48163	572 aa		27.57	■■■□□ 2
CYLD-208	ENST00000564634	NCKAP1L	P55160	1127 aa		27.57	■■■□□ 2
CYLD-208	ENST00000564634	GPC5	P78333	572 aa		27.57	■■■□□ 2
CYLD-208	ENST00000564634	LIN9	Q5TKA1	542 aa		27.57	■■■□□ 2
CYLD-208	ENST00000564634	CEP57	Q86XR8	500 aa		27.57	■■■□□ 2
CYLD-208	ENST00000564634	PDILT	Q8N807	584 aa		27.57	■■■□□ 2
CYLD-208	ENST00000564634	KCNN1	Q92952	543 aa		27.57	■■■□□ 2
CYLD-208	ENST00000564634	MED19	A0JLT2	244 aa	Predicted RBP	27.56	■■■□□ 2
CYLD-208	ENST00000564634	CCL16	O15467	120 aa		27.56	■■■□□ 2
CYLD-208	ENST00000564634	KIF4A	O95239	1232 aa		27.56	■■■□□ 2
CYLD-208	ENST00000564634	MAPT	P10636	758 aa	Known RBP	27.56	■■■□□ 2
CYLD-208	ENST00000564634	PSMD5	Q16401	504 aa		27.56	■■■□□ 2
CYLD-208	ENST00000564634	FAM171A1	Q5VUB5	890 aa		27.56	■■■□□ 2
CYLD-208	ENST00000564634	SHC4	Q6S5L8	630 aa		27.56	■■■□□ 2
CYLD-208	ENST00000564634	HAUS6	Q7Z4H7	955 aa		27.56	■■■□□ 2
CYLD-208	ENST00000564634	POLI	Q9UNA4	740 aa		27.56	■■■□□ 2
CYLD-208	ENST00000564634	MIA3	Q5JRA6	1907 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	TRAK2	O60296	914 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	C8A	P07357	584 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	KRT85	P78386	507 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	TUSC3	Q13454	348 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	SNW1	Q13573	536 aa	Known RBP	27.55	■■■□□ 2
CYLD-208	ENST00000564634	PPM1L	Q5SGD2	360 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	DYM	Q7RTS9	669 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	DGLUCY	Q7Z3D6	616 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	DCLK2	Q8N568	766 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	DDX12P	Q92771	950 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	TTPAL	Q9BTX7	342 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	TARS2	Q9BW92	718 aa	Known RBP	27.55	■■■□□ 2
CYLD-208	ENST00000564634	ZHX3	Q9H4I2	956 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	PTPRH	Q9HD43	1115 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	SNTG2	Q9NY99	539 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	CDH7	Q9ULB5	785 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	27.55	■■■□□ 2
CYLD-208	ENST00000564634	DNAH14	Q0VDD8	3507 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	FANCM	Q8IYD8	2048 aa		27.55	■■■□□ 2
CYLD-208	ENST00000564634	MYMK	A6NI61	221 aa		27.54	■■■□□ 2
CYLD-208	ENST00000564634	CLSTN3	Q9BQT9	956 aa		27.54	■■■□□ 2
CYLD-208	ENST00000564634	CUEDC2	Q9H467	287 aa		27.54	■■■□□ 2
CYLD-208	ENST00000564634	ADAM12	O43184	909 aa		27.53	■■■□□ 2
CYLD-208	ENST00000564634	ABCD1	P33897	745 aa		27.53	■■■□□ 2
CYLD-208	ENST00000564634	STARD6	P59095	220 aa		27.53	■■■□□ 2
CYLD-208	ENST00000564634	PIK3R5	Q8WYR1	880 aa		27.53	■■■□□ 2
CYLD-208	ENST00000564634	FGF13	Q92913	245 aa		27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms