RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 ALDH1L1O75891 902 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 SEC31AO94979 1220 aaKnown RBP6.15□□□□□ -1.42
CHD9-210ENST00000564582 PRLRP16471 622 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 ATP5JP18859 108 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 HSD3B2P26439 372 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 HOXA7P31268 230 aaPredicted RBP6.15□□□□□ -1.42
CHD9-210ENST00000564582 IL13P35225 146 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 GJA9P57773 515 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 KRT83P78385 493 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 AKAP17AQ02040 695 aaKnown RBP6.15□□□□□ -1.42
CHD9-210ENST00000564582 TBX2Q13207 712 aaPredicted RBP6.15□□□□□ -1.42
CHD9-210ENST00000564582 MTX1Q13505 466 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 RIPK1Q13546 671 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 SEPT2Q15019 361 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 IMMTQ16891 758 aaKnown RBP6.15□□□□□ -1.42
CHD9-210ENST00000564582 C21orf62-AS1Q17RA5 79 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 CCDC40Q4G0X9 1142 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 FAM26FQ5R3K3 315 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 CPZQ66K79 652 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 CDCA2Q69YH5 1023 aaPredicted RBP6.15□□□□□ -1.42
CHD9-210ENST00000564582 ISM2Q6H9L7 571 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 PPP4R3AQ6IN85 833 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 SDE2Q6IQ49 451 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 CNNM4Q6P4Q7 775 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 TRMT10BQ6PF06 316 aaKnown RBP6.15□□□□□ -1.42
CHD9-210ENST00000564582 DPP8Q6V1X1 898 aaPredicted RBP6.15□□□□□ -1.42
CHD9-210ENST00000564582 CCDC121Q6ZUS5 278 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 C11orf57Q6ZUT1 292 aaPredicted RBP6.15□□□□□ -1.42
CHD9-210ENST00000564582 CACNA2D4Q7Z3S7 1137 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 FAM124AQ86V42 546 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 LRRTM3Q86VH5 581 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 TEX9Q8N6V9 391 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 TSPYL6Q8N831 410 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 WDR48Q8TAF3 677 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 MIPOL1Q8TD10 442 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 OTUD7AQ8TE49 926 aaPredicted RBP6.15□□□□□ -1.42
CHD9-210ENST00000564582 KCNC2Q96PR1 638 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 SPATA25Q9BR10 227 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 JPH2Q9BR39 696 aaPredicted RBP6.15□□□□□ -1.42
CHD9-210ENST00000564582 PARD6AQ9NPB6 346 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 USP40Q9NVE5 1235 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 CWC25Q9NXE8 425 aaPredicted RBP6.15□□□□□ -1.42
CHD9-210ENST00000564582 RBPJLQ9UBG7 517 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 FTSJ1Q9UET6 329 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 SWAP70Q9UH65 585 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 ZFP69BQ9UJL9 534 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 B3GALT1Q9Y5Z6 326 aa6.15□□□□□ -1.42
CHD9-210ENST00000564582 ITIH6Q6UXX5 1313 aa6.15□□□□□ -1.43
CHD9-210ENST00000564582 WDR17Q8IZU2 1322 aa6.15□□□□□ -1.43
CHD9-210ENST00000564582 CDHR2Q9BYE9 1310 aa6.15□□□□□ -1.43
CHD9-210ENST00000564582 ATP7AQ04656 1500 aa6.15□□□□□ -1.43
CHD9-210ENST00000564582 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.15□□□□□ -1.43
CHD9-210ENST00000564582 A0A1B0GTL3 188 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 CFAP73A6NFT4 308 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 BTBD11A6QL63 1104 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 H3BQF6 201 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 H7C1D1 291 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 DDX3XO00571 662 aaKnown RBP eCLIP6.14□□□□□ -1.43
CHD9-210ENST00000564582 NDUFAB1O14561 156 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 FOXP2O15409 715 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 HSF2BPO75031 334 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 SURF6O75683 361 aaKnown RBP6.14□□□□□ -1.43
CHD9-210ENST00000564582 KRT37O76014 449 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 CDKL5O76039 1030 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 NEBLO76041 1014 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 PRPF6O94906 941 aaKnown RBP6.14□□□□□ -1.43
CHD9-210ENST00000564582 C4BPAP04003 597 aaKnown RBP6.14□□□□□ -1.43
CHD9-210ENST00000564582 CYP1A1P04798 512 aaPredicted RBP6.14□□□□□ -1.43
CHD9-210ENST00000564582 IFIT2P09913 472 aaKnown RBP6.14□□□□□ -1.43
CHD9-210ENST00000564582 GHRP10912 638 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 ZNF28P17035 718 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 TNFRSF8P28908 595 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 MECP2P51608 486 aaKnown RBP6.14□□□□□ -1.43
CHD9-210ENST00000564582 USP14P54578 494 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 ACTN3Q08043 901 aaPredicted RBP6.14□□□□□ -1.43
CHD9-210ENST00000564582 GRIK3Q13003 919 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 TMEM132BQ14DG7 1078 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 SART3Q15020 963 aaKnown RBP6.14□□□□□ -1.43
CHD9-210ENST00000564582 STK38Q15208 465 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 ZNF174Q15697 407 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 SMAD2Q15796 467 aaKnown RBP6.14□□□□□ -1.43
CHD9-210ENST00000564582 CCDC57Q2TAC2 916 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 FBLN7Q53RD9 439 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 HSP90AB2PQ58FF8 381 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 DALRD3Q5D0E6 543 aaKnown RBP6.14□□□□□ -1.43
CHD9-210ENST00000564582 PRR31Q5SQ13 230 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 CPLX2Q6PUV4 134 aaKnown RBP6.14□□□□□ -1.43
CHD9-210ENST00000564582 CYP26C1Q6V0L0 522 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 KIF18BQ86Y91 864 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 DHX37Q8IY37 1157 aaKnown RBP6.14□□□□□ -1.43
CHD9-210ENST00000564582 ADAMTS17Q8TE56 1095 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 LZICQ8WZA0 190 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 N4BP2L2Q92802 583 aaPredicted RBP6.14□□□□□ -1.43
CHD9-210ENST00000564582 GDAP1L1Q96MZ0 367 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 NEK1Q96PY6 1258 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 SH3GL2Q99962 352 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 TSGA10Q9BZW7 698 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 PCIF1Q9H4Z3 704 aa6.14□□□□□ -1.43
CHD9-210ENST00000564582 BICC1Q9H694 974 aaKnown RBP6.14□□□□□ -1.43
CHD9-210ENST00000564582 VCPKMTQ9H867 229 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms