RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 VARS2Q5ST30 1063 aaKnown RBP26.12■■□□□ 1.77
NME3-206ENST00000564252 ARL6IP4Q66PJ3 421 aaKnown RBP26.12■■□□□ 1.77
NME3-206ENST00000564252 SLC8B1Q6J4K2 584 aa26.12■■□□□ 1.77
NME3-206ENST00000564252 PHLDB3Q6NSJ2 640 aa26.12■■□□□ 1.77
NME3-206ENST00000564252 FRMD5Q7Z6J6 570 aa26.12■■□□□ 1.77
NME3-206ENST00000564252 C18orf25Q96B23 403 aaPredicted RBP26.12■■□□□ 1.77
NME3-206ENST00000564252 KCNG1Q9UIX4 513 aa26.12■■□□□ 1.77
NME3-206ENST00000564252 RIF1Q5UIP0 2472 aaKnown RBP26.11■■□□□ 1.77
NME3-206ENST00000564252 WDR87Q6ZQQ6 2873 aa26.11■■□□□ 1.77
NME3-206ENST00000564252 H3BQV1 296 aa26.11■■□□□ 1.77
NME3-206ENST00000564252 PLA2G4BP0C869 781 aa26.11■■□□□ 1.77
NME3-206ENST00000564252 RFX1P22670 979 aa26.11■■□□□ 1.77
NME3-206ENST00000564252 SMTNP53814 917 aa26.11■■□□□ 1.77
NME3-206ENST00000564252 NOLC1Q14978 699 aaKnown RBP eCLIP26.11■■□□□ 1.77
NME3-206ENST00000564252 TMEM119Q4V9L6 283 aa26.11■■□□□ 1.77
NME3-206ENST00000564252 PABPC1LQ4VXU2 614 aaKnown RBP26.11■■□□□ 1.77
NME3-206ENST00000564252 MTSS1LQ765P7 747 aa26.11■■□□□ 1.77
NME3-206ENST00000564252 KCND2Q9NZV8 630 aa26.11■■□□□ 1.77
NME3-206ENST00000564252 ANKFY1Q9P2R3 1169 aa26.11■■□□□ 1.77
NME3-206ENST00000564252 SYN3O14994 580 aa26.1■■□□□ 1.77
NME3-206ENST00000564252 TBC1D4O60343 1298 aa26.1■■□□□ 1.77
NME3-206ENST00000564252 ABLIM3O94929 683 aa26.1■■□□□ 1.77
NME3-206ENST00000564252 RPL9P32969 192 aaKnown RBP26.1■■□□□ 1.77
NME3-206ENST00000564252 SLC10A6Q3KNW5 377 aa26.1■■□□□ 1.77
NME3-206ENST00000564252 SEZ6Q53EL9 994 aa26.1■■□□□ 1.77
NME3-206ENST00000564252 ZNF461Q8TAF7 563 aa26.1■■□□□ 1.77
NME3-206ENST00000564252 KCNH3Q9ULD8 1083 aa26.1■■□□□ 1.77
NME3-206ENST00000564252 NPHP3-ACAD11A0A0J9YXS1 232 aa26.09■■□□□ 1.77
NME3-206ENST00000564252 WDR27A2RRH5 827 aa26.09■■□□□ 1.77
NME3-206ENST00000564252 GPC5P78333 572 aa26.09■■□□□ 1.77
NME3-206ENST00000564252 MCL1Q07820 350 aa26.09■■□□□ 1.77
NME3-206ENST00000564252 MRPL58Q14197 206 aaKnown RBP26.09■■□□□ 1.77
NME3-206ENST00000564252 ARSHQ5FYA8 562 aa26.09■■□□□ 1.77
NME3-206ENST00000564252 ZPBP2Q6X784 338 aa26.09■■□□□ 1.77
NME3-206ENST00000564252 NPAS3Q8IXF0 933 aa26.09■■□□□ 1.77
NME3-206ENST00000564252 CDK5RAP3Q96JB5 506 aa26.09■■□□□ 1.77
NME3-206ENST00000564252 HAPLN2Q9GZV7 340 aa26.09■■□□□ 1.77
NME3-206ENST00000564252 NUB1Q9Y5A7 615 aa26.09■■□□□ 1.77
NME3-206ENST00000564252 PTPRZ1P23471 2315 aaPredicted RBP26.08■■□□□ 1.77
NME3-206ENST00000564252 ARHGEF37A1IGU5 675 aa26.08■■□□□ 1.77
NME3-206ENST00000564252 CENPBP07199 599 aaPredicted RBP26.08■■□□□ 1.77
NME3-206ENST00000564252 CACNB1Q02641 598 aaPredicted RBP26.08■■□□□ 1.77
NME3-206ENST00000564252 SUSD3Q96L08 255 aa26.08■■□□□ 1.77
NME3-206ENST00000564252 DLGAP2Q9P1A6 1054 aa26.08■■□□□ 1.77
NME3-206ENST00000564252 CLDN3O15551 220 aa26.07■■□□□ 1.76
NME3-206ENST00000564252 RHOP08100 348 aa26.07■■□□□ 1.76
NME3-206ENST00000564252 NCKAP1LP55160 1127 aa26.07■■□□□ 1.76
NME3-206ENST00000564252 SLC5A9Q2M3M2 681 aa26.07■■□□□ 1.76
NME3-206ENST00000564252 LRRC15Q8TF66 581 aa26.07■■□□□ 1.76
NME3-206ENST00000564252 ING5Q8WYH8 240 aa26.07■■□□□ 1.76
NME3-206ENST00000564252 KCNN1Q92952 543 aa26.07■■□□□ 1.76
NME3-206ENST00000564252 NKD2Q969F2 451 aaPredicted RBP26.07■■□□□ 1.76
NME3-206ENST00000564252 AK8Q96MA6 479 aa26.07■■□□□ 1.76
NME3-206ENST00000564252 AVENQ9NQS1 362 aaPredicted RBP26.07■■□□□ 1.76
NME3-206ENST00000564252 LARSQ9P2J5 1176 aaKnown RBP26.07■■□□□ 1.76
NME3-206ENST00000564252 TUBGCP4Q9UGJ1 667 aa26.07■■□□□ 1.76
NME3-206ENST00000564252 MRPS23Q9Y3D9 190 aaKnown RBP26.07■■□□□ 1.76
NME3-206ENST00000564252 SIT1Q9Y3P8 196 aa26.07■■□□□ 1.76
NME3-206ENST00000564252 FAM186AA6NE01 2351 aa26.07■■□□□ 1.76
NME3-206ENST00000564252 H7C4K7 107 aa26.06■■□□□ 1.76
NME3-206ENST00000564252 DCNP07585 359 aaKnown RBP26.06■■□□□ 1.76
NME3-206ENST00000564252 ATF2P15336 505 aa26.06■■□□□ 1.76
NME3-206ENST00000564252 STARD6P59095 220 aa26.06■■□□□ 1.76
NME3-206ENST00000564252 TCEAL8Q8IYN2 117 aa26.06■■□□□ 1.76
NME3-206ENST00000564252 KXD1Q9BQD3 176 aa26.06■■□□□ 1.76
NME3-206ENST00000564252 FBXL5Q9UKA1 691 aa26.06■■□□□ 1.76
NME3-206ENST00000564252 COL4A3Q01955 1670 aa26.06■■□□□ 1.76
NME3-206ENST00000564252 SLC26A4O43511 780 aa26.05■■□□□ 1.76
NME3-206ENST00000564252 LRG1P02750 347 aa26.05■■□□□ 1.76
NME3-206ENST00000564252 CXCL8P10145 99 aa26.05■■□□□ 1.76
NME3-206ENST00000564252 ELF1P32519 619 aa26.05■■□□□ 1.76
NME3-206ENST00000564252 ARPP19P56211 112 aa26.05■■□□□ 1.76
NME3-206ENST00000564252 SPECC1Q5M775 1068 aa26.05■■□□□ 1.76
NME3-206ENST00000564252 POTEHQ6S545 545 aa26.05■■□□□ 1.76
NME3-206ENST00000564252 TMEM130Q8N3G9 435 aa26.05■■□□□ 1.76
NME3-206ENST00000564252 PJA1Q8NG27 643 aa26.05■■□□□ 1.76
NME3-206ENST00000564252 TBC1D32Q96NH3 1257 aa26.05■■□□□ 1.76
NME3-206ENST00000564252 FOXQ1Q9C009 403 aa26.05■■□□□ 1.76
NME3-206ENST00000564252 ODF2LQ9ULJ1 636 aa26.05■■□□□ 1.76
NME3-206ENST00000564252 SMC3Q9UQE7 1217 aa26.05■■□□□ 1.76
NME3-206ENST00000564252 H0YCG3 227 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 PRRG1O14668 218 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 SEC24AO95486 1093 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 PTPN2P17706 415 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 MCM4P33991 863 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 MCM2P49736 904 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 SNW1Q13573 536 aaKnown RBP26.04■■□□□ 1.76
NME3-206ENST00000564252 CTXN3Q4LDR2 81 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 TPGS2Q68CL5 300 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 HAUS6Q7Z4H7 955 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 DDX12PQ92771 950 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 SHDQ96IW2 340 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 REEP2Q9BRK0 252 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 PLEKHA5Q9HAU0 1116 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 CYP4F11Q9HBI6 524 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 GDE1Q9NZC3 331 aa26.04■■□□□ 1.76
NME3-206ENST00000564252 SPTBN4Q9H254 2564 aa26.03■■□□□ 1.76
NME3-206ENST00000564252 TTC26A0AVF1 554 aa26.03■■□□□ 1.76
NME3-206ENST00000564252 CLTAP09496 248 aa26.03■■□□□ 1.76
NME3-206ENST00000564252 GLULP15104 373 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms