RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 VARS2Q5ST30 1063 aaKnown RBP18.29■□□□□ 0.52
CCNF-203ENST00000564236 BRAPQ7Z569 592 aa18.29■□□□□ 0.52
CCNF-203ENST00000564236 FGF13Q92913 245 aa18.29■□□□□ 0.52
CCNF-203ENST00000564236 ZBTB45Q96K62 511 aaPredicted RBP18.29■□□□□ 0.52
CCNF-203ENST00000564236 SUSD3Q96L08 255 aa18.29■□□□□ 0.52
CCNF-203ENST00000564236 TCHPQ9BT92 498 aa18.29■□□□□ 0.52
CCNF-203ENST00000564236 CCL16O15467 120 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 CLDN3O15551 220 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 PIGRP01833 764 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 ADRB2P07550 413 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 CFHP08603 1231 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 NTHL1P78549 312 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 ROR1Q01973 937 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 ZBTB6Q15916 424 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 MTSS1LQ765P7 747 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 TCEAL8Q8IYN2 117 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 GPR152Q8TDT2 470 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 FGF14Q92915 247 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 CDK5RAP3Q96JB5 506 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 TSPAN18Q96SJ8 248 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 HAPLN2Q9GZV7 340 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 DNMT3BQ9UBC3 853 aaKnown RBP18.28■□□□□ 0.52
CCNF-203ENST00000564236 MAFFQ9ULX9 164 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 SMC3Q9UQE7 1217 aa18.28■□□□□ 0.52
CCNF-203ENST00000564236 TTC26A0AVF1 554 aa18.27■□□□□ 0.52
CCNF-203ENST00000564236 WDR27A2RRH5 827 aa18.27■□□□□ 0.52
CCNF-203ENST00000564236 I3L4J1 428 aa18.27■□□□□ 0.52
CCNF-203ENST00000564236 FAM189A1O60320 539 aa18.27■□□□□ 0.52
CCNF-203ENST00000564236 GFRA3O60609 400 aa18.27■□□□□ 0.52
CCNF-203ENST00000564236 ATF2P15336 505 aa18.27■□□□□ 0.52
CCNF-203ENST00000564236 LRPAP1P30533 357 aa18.27■□□□□ 0.52
CCNF-203ENST00000564236 LONP1P36776 959 aaKnown RBP18.27■□□□□ 0.52
CCNF-203ENST00000564236 ZRSR1Q15695 479 aaKnown RBP18.27■□□□□ 0.52
CCNF-203ENST00000564236 KYAT1Q16773 422 aa18.27■□□□□ 0.52
CCNF-203ENST00000564236 PABPC1LQ4VXU2 614 aaKnown RBP18.27■□□□□ 0.52
CCNF-203ENST00000564236 LARP1BQ659C4 914 aaKnown RBP18.27■□□□□ 0.52
CCNF-203ENST00000564236 PARM1Q6UWI2 310 aa18.27■□□□□ 0.52
CCNF-203ENST00000564236 DTWD2Q8NBA8 298 aa18.27■□□□□ 0.52
CCNF-203ENST00000564236 ITFG1Q8TB96 612 aa18.27■□□□□ 0.52
CCNF-203ENST00000564236 LRRC15Q8TF66 581 aa18.27■□□□□ 0.52
CCNF-203ENST00000564236 C18orf25Q96B23 403 aaPredicted RBP18.27■□□□□ 0.52
CCNF-203ENST00000564236 ARHGEF3Q9NR81 526 aa18.27■□□□□ 0.52
CCNF-203ENST00000564236 BLOC1S4Q9NUP1 217 aa18.27■□□□□ 0.52
CCNF-203ENST00000564236 H7C4K7 107 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 MICAL2O94851 1124 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 CLTAP09496 248 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 CYP3A5P20815 502 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 AARSP49588 968 aaKnown RBP eCLIP18.26■□□□□ 0.51
CCNF-203ENST00000564236 STARD6P59095 220 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 RAD51AP2Q09MP3 1159 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 CUL4AQ13619 759 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 TPGS2Q68CL5 300 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 HAUS6Q7Z4H7 955 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 NPAS3Q8IXF0 933 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 CALML4Q96GE6 196 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 FIZ1Q96SL8 496 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 PLIN2Q99541 437 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 REEP2Q9BRK0 252 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 RPP25Q9BUL9 199 aaKnown RBP18.26■□□□□ 0.51
CCNF-203ENST00000564236 TBC1D17Q9HA65 648 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 HCFC1R1Q9NWW0 138 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 GDE1Q9NZC3 331 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 DLGAP2Q9P1A6 1054 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 ANKFY1Q9P2R3 1169 aa18.26■□□□□ 0.51
CCNF-203ENST00000564236 NPHP3-ACAD11A0A0J9YXS1 232 aa18.25■□□□□ 0.51
CCNF-203ENST00000564236 M0QZQ0 153 aa18.25■□□□□ 0.51
CCNF-203ENST00000564236 ABCD1P33897 745 aa18.25■□□□□ 0.51
CCNF-203ENST00000564236 UBA7P41226 1012 aa18.25■□□□□ 0.51
CCNF-203ENST00000564236 DDX23Q9BUQ8 820 aaKnown RBP18.25■□□□□ 0.51
CCNF-203ENST00000564236 OXCT2Q9BYC2 517 aaPredicted RBP18.25■□□□□ 0.51
CCNF-203ENST00000564236 FBXL5Q9UKA1 691 aa18.25■□□□□ 0.51
CCNF-203ENST00000564236 CA14Q9ULX7 337 aa18.25■□□□□ 0.51
CCNF-203ENST00000564236 TBX20Q9UMR3 447 aa18.25■□□□□ 0.51
CCNF-203ENST00000564236 NUB1Q9Y5A7 615 aa18.25■□□□□ 0.51
CCNF-203ENST00000564236 PRR23AA6NEV1 266 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 RHOP08100 348 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 CXCL8P10145 99 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 GPC5P78333 572 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 ANGPT1Q15389 498 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 APPL2Q8NEU8 664 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 BEST2Q8NFU1 509 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 RAD54LQ92698 747 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 DDX12PQ92771 950 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 CCSER1Q9C0I3 900 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 ST6GALNAC4Q9H4F1 302 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 PARVGQ9HBI0 331 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 TUBGCP4Q9UGJ1 667 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 PCDHB8Q9UN66 801 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 POLIQ9UNA4 740 aa18.24■□□□□ 0.51
CCNF-203ENST00000564236 ZFHX2Q9C0A1 2572 aaPredicted RBP18.24■□□□□ 0.51
CCNF-203ENST00000564236 A0A0B4J269 797 aa18.23■□□□□ 0.51
CCNF-203ENST00000564236 ECI2O75521 394 aa18.23■□□□□ 0.51
CCNF-203ENST00000564236 OAZ2O95190 189 aa18.23■□□□□ 0.51
CCNF-203ENST00000564236 HARSP12081 509 aaKnown RBP18.23■□□□□ 0.51
CCNF-203ENST00000564236 GTF2BQ00403 316 aa18.23■□□□□ 0.51
CCNF-203ENST00000564236 CACNB1Q02641 598 aaPredicted RBP18.23■□□□□ 0.51
CCNF-203ENST00000564236 GRIN1Q05586 938 aa18.23■□□□□ 0.51
CCNF-203ENST00000564236 SLC5A9Q2M3M2 681 aa18.23■□□□□ 0.51
CCNF-203ENST00000564236 SEZ6Q53EL9 994 aa18.23■□□□□ 0.51
CCNF-203ENST00000564236 PRSS36Q5K4E3 855 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms