RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 INPPL1O15357 1258 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 EFCAB14O75071 495 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 TNNC2P02585 160 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 NFICP08651 508 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 TMEM191BP0C7N4 346 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 TFAMQ00059 246 aaKnown RBP13.94□□□□□ -0.18
SPG7-209ENST00000564047 KCNMA1Q12791 1236 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 PPIGQ13427 754 aaKnown RBP eCLIP13.94□□□□□ -0.181e-13■■■■□ 19.7
SPG7-209ENST00000564047 SYCP1Q15431 976 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 ZBTB6Q15916 424 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 EXOC3L4Q17RC7 722 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 LMBRD2Q68DH5 695 aaPredicted RBP13.94□□□□□ -0.18
SPG7-209ENST00000564047 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.94□□□□□ -0.18
SPG7-209ENST00000564047 RNF169Q8NCN4 708 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 OR5B17Q8NGF7 314 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 BADQ92934 168 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 LPPQ93052 612 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 KIF12Q96FN5 646 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 ZMAT2Q96NC0 199 aaKnown RBP13.94□□□□□ -0.18
SPG7-209ENST00000564047 KLK14Q9P0G3 267 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 SIK3Q9Y2K2 1263 aa13.94□□□□□ -0.18
SPG7-209ENST00000564047 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.94□□□□□ -0.18
SPG7-209ENST00000564047 ITIH6Q6UXX5 1313 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 XIRP2A4UGR9 3374 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 MEIS3P2A8K0S8 358 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 XPOTO43592 962 aaKnown RBP13.93□□□□□ -0.18
SPG7-209ENST00000564047 BAIAP3O94812 1187 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 ACTN1P12814 892 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 CYP3A5P20815 502 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 MLH1P40692 756 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 FPGSQ05932 587 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 BIRC3Q13489 604 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 EPC2Q52LR7 807 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 TDRD10Q5VZ19 366 aaKnown RBP13.93□□□□□ -0.18
SPG7-209ENST00000564047 SPECC1LQ69YQ0 1117 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 TRAPPC11Q7Z392 1133 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 CRIPAKQ8N1N5 446 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 EHBP1Q8NDI1 1231 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 GSTCDQ8NEC7 633 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 FBXL13Q8NEE6 735 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 BEST2Q8NFU1 509 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 RSPH1Q8WYR4 309 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 RPS6KC1Q96S38 1066 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 GAD1Q99259 594 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 MTMR12Q9C0I1 747 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 CXCL16Q9H2A7 254 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 RAB20Q9NX57 234 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 GCNT4Q9P109 453 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 UBQLN1Q9UMX0 589 aaKnown RBP13.93□□□□□ -0.18
SPG7-209ENST00000564047 PCDHB7Q9Y5E2 793 aa13.93□□□□□ -0.18
SPG7-209ENST00000564047 ARL5CA6NH57 179 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 PTGESO14684 152 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 HOXA2O43364 376 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 PHACTR2O75167 634 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 OFD1O75665 1012 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 PON1P27169 355 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 GLRA4Q5JXX5 417 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 GLB1LQ6UWU2 654 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 NPAS4Q8IUM7 802 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 C1orf127Q8N9H9 656 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 TAS1R2Q8TE23 839 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 IQCDQ96DY2 449 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 PCMTD1Q96MG8 357 aaPredicted RBP13.92□□□□□ -0.18
SPG7-209ENST00000564047 ZFP42Q96MM3 310 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 PPP1R10Q96QC0 940 aaKnown RBP13.92□□□□□ -0.18
SPG7-209ENST00000564047 CRACR2AQ9BSW2 395 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 NUP58Q9BVL2 599 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 PLCB1Q9NQ66 1216 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 SLC38A7Q9NVC3 462 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 ITGA11Q9UKX5 1188 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 LRFN2Q9ULH4 789 aa13.92□□□□□ -0.18
SPG7-209ENST00000564047 ZC3H11AO75152 810 aaKnown RBP eCLIP13.91□□□□□ -0.18
SPG7-209ENST00000564047 VNN1O95497 513 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 HLA-DRAP01903 254 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 FGBP02675 491 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 THP07101 528 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 ACRP10323 421 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 SLC9A1P19634 815 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 IBSPP21815 317 aaPredicted RBP13.91□□□□□ -0.18
SPG7-209ENST00000564047 PIK3CAP42336 1068 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 SCNN1GP51170 649 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 GRIK3Q13003 919 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 NCOA4Q13772 614 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 PTPN21Q16825 1174 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 FIGNQ5HY92 759 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.91□□□□□ -0.18
SPG7-209ENST00000564047 C16orf59Q7L2K0 433 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 TMC6Q7Z403 805 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 DRC7Q8IY82 874 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 NEK11Q8NG66 645 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 LMO3Q8TAP4 145 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 SEMA4DQ92854 862 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 FAM84AQ96KN4 292 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 RNPC3Q96LT9 517 aaKnown RBP13.91□□□□□ -0.18
SPG7-209ENST00000564047 LSM14BQ9BX40 385 aaKnown RBP13.91□□□□□ -0.18
SPG7-209ENST00000564047 INTS2Q9H0H0 1204 aaKnown RBP13.91□□□□□ -0.18
SPG7-209ENST00000564047 RNF19AQ9NV58 838 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 MIOSQ9NXC5 875 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 DPP3Q9NY33 737 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 KANSL3Q9P2N6 904 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms