RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 ZNF197O14709 1029 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 ADAM12O43184 909 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 PI15O43692 258 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 FAM13AO94988 1023 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 NPR3P17342 541 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 LIG4P49917 911 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 NTHL1P78549 312 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 PPP2R3AQ06190 1150 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 IL17AQ16552 155 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 CTXN3Q4LDR2 81 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 XKR4Q5GH76 650 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 SPECC1Q5M775 1068 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 HYIQ5T013 277 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 CYP4A22Q5TCH4 519 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 TPGS2Q68CL5 300 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 ZNF280DQ6N043 979 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 ZC3H14Q6PJT7 736 aaKnown RBP10.43□□□□□ -0.74
CLN6-203ENST00000563917 PARM1Q6UWI2 310 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 ALKAL1Q6UXT8 129 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 USP37Q86T82 979 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 DAW1Q8N136 415 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 MMTAG2Q9BU76 263 aaKnown RBP10.43□□□□□ -0.74
CLN6-203ENST00000563917 OXCT2Q9BYC2 517 aaPredicted RBP10.43□□□□□ -0.74
CLN6-203ENST00000563917 CXCL16Q9H2A7 254 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 SEMA4AQ9H3S1 761 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 ZHX3Q9H4I2 956 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 PLEKHA5Q9HAU0 1116 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 CYP4F11Q9HBI6 524 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 PTPRHQ9HD43 1115 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 SLC2A4RGQ9NR83 387 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 GDE1Q9NZC3 331 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 CNTN3Q9P232 1028 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 ODF2LQ9ULJ1 636 aa10.43□□□□□ -0.74
CLN6-203ENST00000563917 KRBA1A5PL33 1030 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 HNRNPDLO14979 420 aaKnown RBP10.42□□□□□ -0.74
CLN6-203ENST00000563917 NCAM2O15394 837 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 TBCAO75347 108 aaKnown RBP10.42□□□□□ -0.74
CLN6-203ENST00000563917 CLTAP09496 248 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 MAPTP10636 758 aaKnown RBP10.42□□□□□ -0.74
CLN6-203ENST00000563917 CPB1P15086 417 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 ATF2P15336 505 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 PROZP22891 400 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 ROR1Q01973 937 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 PRKCQQ04759 706 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 SOX4Q06945 474 aaPredicted RBP10.42□□□□□ -0.74
CLN6-203ENST00000563917 MAPK7Q13164 816 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 DHX8Q14562 1220 aaKnown RBP10.42□□□□□ -0.74
CLN6-203ENST00000563917 SLC8B1Q6J4K2 584 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 KCNK18Q7Z418 384 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 HAUS6Q7Z4H7 955 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 BRAPQ7Z569 592 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 FRMD5Q7Z6J6 570 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 MYCT1Q8N699 235 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 TMEM161BQ8NDZ6 487 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 ITFG1Q8TB96 612 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 ING5Q8WYH8 240 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 KIF12Q96FN5 646 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 ZNF512Q96ME7 567 aaPredicted RBP10.42□□□□□ -0.74
CLN6-203ENST00000563917 TSPAN18Q96SJ8 248 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 CORO1BQ9BR76 489 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 BCO2Q9BYV7 579 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 MAFFQ9ULX9 164 aa10.42□□□□□ -0.74
CLN6-203ENST00000563917 ARHGEF37A1IGU5 675 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 PRR23AA6NEV1 266 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 K7ENM7 598 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 DCNP07585 359 aaKnown RBP10.41□□□□□ -0.74
CLN6-203ENST00000563917 RHOP08100 348 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 PDCP20941 246 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 SLC12A3P55017 1021 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 GPC5P78333 572 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 MCL1Q07820 350 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 UBXN2BQ14CS0 331 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 MLF2Q15773 248 aaPredicted RBP10.41□□□□□ -0.74
CLN6-203ENST00000563917 SLC44A4Q53GD3 710 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 DSTYKQ6XUX3 929 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 PDZD4Q76G19 769 aaPredicted RBP10.41□□□□□ -0.74
CLN6-203ENST00000563917 TAS1R3Q7RTX0 852 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 GPBP1Q86WP2 473 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 NPAS3Q8IXF0 933 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 LEMD2Q8NC56 503 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 C3orf58Q8NDZ4 430 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 FGF14Q92915 247 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 C18orf25Q96B23 403 aaPredicted RBP10.41□□□□□ -0.74
CLN6-203ENST00000563917 FAM212AQ96EL1 285 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 MCRS1Q96EZ8 462 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 ZBTB45Q96K62 511 aaPredicted RBP10.41□□□□□ -0.74
CLN6-203ENST00000563917 SUSD3Q96L08 255 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 ZMAT2Q96NC0 199 aaKnown RBP10.41□□□□□ -0.74
CLN6-203ENST00000563917 TBC1D32Q96NH3 1257 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 PNMA5Q96PV4 448 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 RPF1Q9H9Y2 349 aaKnown RBP10.41□□□□□ -0.74
CLN6-203ENST00000563917 PARVGQ9HBI0 331 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 HCFC1R1Q9NWW0 138 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 DNMT3BQ9UBC3 853 aaKnown RBP10.41□□□□□ -0.74
CLN6-203ENST00000563917 CCDC39Q9UFE4 941 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 FBXL5Q9UKA1 691 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 UBQLN1Q9UMX0 589 aaKnown RBP10.41□□□□□ -0.74
CLN6-203ENST00000563917 MRPS17Q9Y2R5 130 aaKnown RBP10.41□□□□□ -0.74
CLN6-203ENST00000563917 CACNA1HO95180 2353 aa10.41□□□□□ -0.74
CLN6-203ENST00000563917 CITO14578 2027 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms