RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 FBXL21Q9UKT6 434 aa19.29■□□□□ 0.68
NME3-205ENST00000563854 TBX20Q9UMR3 447 aa19.29■□□□□ 0.68
NME3-205ENST00000563854 K7ELQ4 463 aaPredicted RBP19.28■□□□□ 0.68
NME3-205ENST00000563854 NARSO43776 548 aaKnown RBP19.28■□□□□ 0.68
NME3-205ENST00000563854 TRAK2O60296 914 aa19.28■□□□□ 0.68
NME3-205ENST00000563854 XYLBO75191 536 aa19.28■□□□□ 0.68
NME3-205ENST00000563854 HNRNPA1P09651 372 aaKnown RBP eCLIP19.28■□□□□ 0.68
NME3-205ENST00000563854 FSHRP23945 695 aa19.28■□□□□ 0.68
NME3-205ENST00000563854 TXLNAP40222 546 aa19.28■□□□□ 0.68
NME3-205ENST00000563854 PPP2R3AQ06190 1150 aa19.28■□□□□ 0.68
NME3-205ENST00000563854 PTPAQ15257 358 aa19.28■□□□□ 0.68
NME3-205ENST00000563854 VARS2Q5ST30 1063 aaKnown RBP19.28■□□□□ 0.68
NME3-205ENST00000563854 ALYREFQ86V81 257 aaKnown RBP19.28■□□□□ 0.68
NME3-205ENST00000563854 FLCNQ8NFG4 579 aa19.28■□□□□ 0.68
NME3-205ENST00000563854 FAM212AQ96EL1 285 aa19.28■□□□□ 0.68
NME3-205ENST00000563854 KIF12Q96FN5 646 aa19.28■□□□□ 0.68
NME3-205ENST00000563854 CLIC6Q96NY7 704 aa19.28■□□□□ 0.68
NME3-205ENST00000563854 CCSER1Q9C0I3 900 aa19.28■□□□□ 0.68
NME3-205ENST00000563854 IGSF9Q9P2J2 1179 aa19.28■□□□□ 0.68
NME3-205ENST00000563854 CCDC39Q9UFE4 941 aa19.28■□□□□ 0.68
NME3-205ENST00000563854 FBXO2Q9UK22 296 aaPredicted RBP19.28■□□□□ 0.68
NME3-205ENST00000563854 DUSP12Q9UNI6 340 aa19.28■□□□□ 0.68
NME3-205ENST00000563854 CLTAP09496 248 aa19.27■□□□□ 0.68
NME3-205ENST00000563854 NMT1P30419 496 aaKnown RBP19.27■□□□□ 0.68
NME3-205ENST00000563854 RPL9P32969 192 aaKnown RBP19.27■□□□□ 0.68
NME3-205ENST00000563854 ZNF131P52739 623 aa19.27■□□□□ 0.68
NME3-205ENST00000563854 PTPN5P54829 565 aa19.27■□□□□ 0.68
NME3-205ENST00000563854 ZBTB41Q5SVQ8 909 aa19.27■□□□□ 0.68
NME3-205ENST00000563854 DYMQ7RTS9 669 aa19.27■□□□□ 0.68
NME3-205ENST00000563854 KRI1Q8N9T8 703 aaKnown RBP19.27■□□□□ 0.68
NME3-205ENST00000563854 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.27■□□□□ 0.681e-9■■■■■ 33.5
NME3-205ENST00000563854 EPS15L1Q9UBC2 864 aa19.27■□□□□ 0.68
NME3-205ENST00000563854 BACE2Q9Y5Z0 518 aa19.27■□□□□ 0.68
NME3-205ENST00000563854 CFHP08603 1231 aa19.26■□□□□ 0.67
NME3-205ENST00000563854 ROR1Q01973 937 aa19.26■□□□□ 0.67
NME3-205ENST00000563854 RRAGBQ5VZM2 374 aa19.26■□□□□ 0.67
NME3-205ENST00000563854 INTS4Q96HW7 963 aaKnown RBP19.26■□□□□ 0.67
NME3-205ENST00000563854 PRRX2Q99811 253 aa19.26■□□□□ 0.67
NME3-205ENST00000563854 MSTO1Q9BUK6 570 aa19.26■□□□□ 0.67
NME3-205ENST00000563854 RPF1Q9H9Y2 349 aaKnown RBP19.26■□□□□ 0.67
NME3-205ENST00000563854 HCFC1R1Q9NWW0 138 aa19.26■□□□□ 0.67
NME3-205ENST00000563854 MTMR6Q9Y217 621 aa19.26■□□□□ 0.67
NME3-205ENST00000563854 SRPRBQ9Y5M8 271 aaKnown RBP19.26■□□□□ 0.67
NME3-205ENST00000563854 PDCD11Q14690 1871 aaKnown RBP19.26■□□□□ 0.67
NME3-205ENST00000563854 LACTBL1A8MY62 500 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 H7C4K7 107 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 TULP1O00294 542 aaPredicted RBP19.25■□□□□ 0.67
NME3-205ENST00000563854 PRRG1O14668 218 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 SYN3O14994 580 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 OGTO15294 1046 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 PAPLNO95428 1278 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 LAMP2P13473 410 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 HOXA9P31269 272 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 ELF1P32519 619 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 DDIT3P35638 169 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 GUCY2FP51841 1108 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 CTXN3Q4LDR2 81 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 ZC2HC1CQ53FD0 456 aaPredicted RBP19.25■□□□□ 0.67
NME3-205ENST00000563854 SFR1Q86XK3 245 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 SIX5Q8N196 739 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 USP28Q96RU2 1077 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 PLEKHA5Q9HAU0 1116 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 STK17AQ9UEE5 414 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 ZDBF2Q9HCK1 2354 aa19.25■□□□□ 0.67
NME3-205ENST00000563854 PIEZO1Q92508 2521 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 TTC26A0AVF1 554 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 STX6O43752 255 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 PIGRP01833 764 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 RFX1P22670 979 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 TCF15Q12870 199 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 ENOX2Q16206 610 aaKnown RBP19.24■□□□□ 0.67
NME3-205ENST00000563854 KYAT1Q16773 422 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 MAP4K3Q8IVH8 894 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 TMEM105Q8N8V8 129 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 ITFG1Q8TB96 612 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 ING5Q8WYH8 240 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 SUSD3Q96L08 255 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 FAM86C1Q9NVL1 165 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 FBXL5Q9UKA1 691 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 UBQLN1Q9UMX0 589 aaKnown RBP19.24■□□□□ 0.67
NME3-205ENST00000563854 NUMBLQ9Y6R0 609 aa19.24■□□□□ 0.67
NME3-205ENST00000563854 WDR27A2RRH5 827 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 TISP43B9A030 160 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 STK25O00506 426 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 LRG1P02750 347 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 SCP2P22307 547 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 MRE11P49959 708 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 UVSSAQ2YD98 709 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 PABPC1LQ4VXU2 614 aaKnown RBP19.23■□□□□ 0.67
NME3-205ENST00000563854 FOXD4L5Q5VV16 416 aaPredicted RBP19.23■□□□□ 0.67
NME3-205ENST00000563854 ASTLQ6HA08 431 aaPredicted RBP19.23■□□□□ 0.67
NME3-205ENST00000563854 SLC8B1Q6J4K2 584 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 ZNF280DQ6N043 979 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 SLC39A4Q6P5W5 647 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 SLC44A3Q8N4M1 653 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 APPL2Q8NEU8 664 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 FOXD4L4Q8WXT5 416 aaPredicted RBP19.23■□□□□ 0.67
NME3-205ENST00000563854 DDX12PQ92771 950 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 FIZ1Q96SL8 496 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 PANK2Q9BZ23 570 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms