RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 PABPC1LQ4VXU2 614 aaKnown RBP22.94■■□□□ 1.26
CHD9-208ENST00000563410 VARS2Q5ST30 1063 aaKnown RBP22.94■■□□□ 1.26
CHD9-208ENST00000563410 SLC8B1Q6J4K2 584 aa22.94■■□□□ 1.26
CHD9-208ENST00000563410 SYT2Q8N9I0 419 aaPredicted RBP22.94■■□□□ 1.26
CHD9-208ENST00000563410 TMEM161BQ8NDZ6 487 aa22.94■■□□□ 1.26
CHD9-208ENST00000563410 NKD2Q969F2 451 aaPredicted RBP22.94■■□□□ 1.26
CHD9-208ENST00000563410 C18orf25Q96B23 403 aaPredicted RBP22.94■■□□□ 1.26
CHD9-208ENST00000563410 TCHPQ9BT92 498 aa22.94■■□□□ 1.26
CHD9-208ENST00000563410 ZNF292O60281 2723 aa22.93■■□□□ 1.26
CHD9-208ENST00000563410 WDR27A2RRH5 827 aa22.93■■□□□ 1.26
CHD9-208ENST00000563410 ABLIM3O94929 683 aa22.93■■□□□ 1.26
CHD9-208ENST00000563410 DCNP07585 359 aaKnown RBP22.93■■□□□ 1.26
CHD9-208ENST00000563410 HARSP12081 509 aaKnown RBP22.93■■□□□ 1.26
CHD9-208ENST00000563410 PLS3P13797 630 aa22.93■■□□□ 1.26
CHD9-208ENST00000563410 RFX1P22670 979 aa22.93■■□□□ 1.26
CHD9-208ENST00000563410 SLC12A3P55017 1021 aa22.93■■□□□ 1.26
CHD9-208ENST00000563410 MRPL58Q14197 206 aaKnown RBP22.93■■□□□ 1.26
CHD9-208ENST00000563410 POTEHQ6S545 545 aa22.93■■□□□ 1.26
CHD9-208ENST00000563410 MTSS1LQ765P7 747 aa22.93■■□□□ 1.26
CHD9-208ENST00000563410 NPAS3Q8IXF0 933 aa22.93■■□□□ 1.26
CHD9-208ENST00000563410 ZNF461Q8TAF7 563 aa22.93■■□□□ 1.26
CHD9-208ENST00000563410 PLIN2Q99541 437 aa22.93■■□□□ 1.26
CHD9-208ENST00000563410 KCNH3Q9ULD8 1083 aa22.93■■□□□ 1.26
CHD9-208ENST00000563410 KIF3AQ9Y496 699 aa22.93■■□□□ 1.26
CHD9-208ENST00000563410 ARHGEF37A1IGU5 675 aa22.92■■□□□ 1.26
CHD9-208ENST00000563410 TOM1L1O75674 476 aa22.92■■□□□ 1.26
CHD9-208ENST00000563410 CD2BP2O95400 341 aaKnown RBP22.92■■□□□ 1.26
CHD9-208ENST00000563410 MAPTP10636 758 aaKnown RBP22.92■■□□□ 1.26
CHD9-208ENST00000563410 STARD6P59095 220 aa22.92■■□□□ 1.26
CHD9-208ENST00000563410 SLC5A9Q2M3M2 681 aa22.92■■□□□ 1.26
CHD9-208ENST00000563410 SLC10A6Q3KNW5 377 aa22.92■■□□□ 1.26
CHD9-208ENST00000563410 SEZ6Q53EL9 994 aa22.92■■□□□ 1.26
CHD9-208ENST00000563410 KCTD17Q8N5Z5 321 aa22.92■■□□□ 1.26
CHD9-208ENST00000563410 ING5Q8WYH8 240 aa22.92■■□□□ 1.26
CHD9-208ENST00000563410 TMX3Q96JJ7 454 aa22.92■■□□□ 1.26
CHD9-208ENST00000563410 SIT1Q9Y3P8 196 aa22.92■■□□□ 1.26
CHD9-208ENST00000563410 VWA3AA6NCI4 1184 aa22.91■■□□□ 1.26
CHD9-208ENST00000563410 SYN3O14994 580 aa22.91■■□□□ 1.26
CHD9-208ENST00000563410 RHOP08100 348 aa22.91■■□□□ 1.26
CHD9-208ENST00000563410 GLULP15104 373 aa22.91■■□□□ 1.26
CHD9-208ENST00000563410 GJB2P29033 226 aa22.91■■□□□ 1.26
CHD9-208ENST00000563410 RPL9P32969 192 aaKnown RBP22.91■■□□□ 1.26
CHD9-208ENST00000563410 STRN3Q13033 797 aa22.91■■□□□ 1.26
CHD9-208ENST00000563410 NOLC1Q14978 699 aaKnown RBP eCLIP22.91■■□□□ 1.26
CHD9-208ENST00000563410 TMEM119Q4V9L6 283 aa22.91■■□□□ 1.26
CHD9-208ENST00000563410 SPECC1Q5M775 1068 aa22.91■■□□□ 1.26
CHD9-208ENST00000563410 KXD1Q9BQD3 176 aa22.91■■□□□ 1.26
CHD9-208ENST00000563410 FOXQ1Q9C009 403 aa22.91■■□□□ 1.26
CHD9-208ENST00000563410 HAPLN2Q9GZV7 340 aa22.91■■□□□ 1.26
CHD9-208ENST00000563410 ANKFY1Q9P2R3 1169 aa22.91■■□□□ 1.26
CHD9-208ENST00000563410 PATJQ8NI35 1801 aa22.91■■□□□ 1.26
CHD9-208ENST00000563410 ANK1P16157 1881 aa22.9■■□□□ 1.26
CHD9-208ENST00000563410 NPHP3-ACAD11A0A0J9YXS1 232 aa22.9■■□□□ 1.26
CHD9-208ENST00000563410 PLA2G4BP0C869 781 aa22.9■■□□□ 1.26
CHD9-208ENST00000563410 SMTNP53814 917 aa22.9■■□□□ 1.26
CHD9-208ENST00000563410 CACNB1Q02641 598 aaPredicted RBP22.9■■□□□ 1.26
CHD9-208ENST00000563410 ARSHQ5FYA8 562 aa22.9■■□□□ 1.26
CHD9-208ENST00000563410 ARL6IP4Q66PJ3 421 aaKnown RBP22.9■■□□□ 1.26
CHD9-208ENST00000563410 TMEM130Q8N3G9 435 aa22.9■■□□□ 1.26
CHD9-208ENST00000563410 PJA1Q8NG27 643 aa22.9■■□□□ 1.26
CHD9-208ENST00000563410 SUSD3Q96L08 255 aa22.9■■□□□ 1.26
CHD9-208ENST00000563410 AVENQ9NQS1 362 aaPredicted RBP22.9■■□□□ 1.26
CHD9-208ENST00000563410 KCND2Q9NZV8 630 aa22.9■■□□□ 1.26
CHD9-208ENST00000563410 KCNG1Q9UIX4 513 aa22.9■■□□□ 1.26
CHD9-208ENST00000563410 FBXL5Q9UKA1 691 aa22.9■■□□□ 1.26
CHD9-208ENST00000563410 MRPS23Q9Y3D9 190 aaKnown RBP22.9■■□□□ 1.26
CHD9-208ENST00000563410 NUB1Q9Y5A7 615 aa22.9■■□□□ 1.26
CHD9-208ENST00000563410 LRRN2O75325 713 aa22.89■■□□□ 1.25
CHD9-208ENST00000563410 SEC24AO95486 1093 aa22.89■■□□□ 1.25
CHD9-208ENST00000563410 ATF2P15336 505 aa22.89■■□□□ 1.25
CHD9-208ENST00000563410 MCL1Q07820 350 aa22.89■■□□□ 1.25
CHD9-208ENST00000563410 SNW1Q13573 536 aaKnown RBP22.89■■□□□ 1.25
CHD9-208ENST00000563410 ZPBP2Q6X784 338 aa22.89■■□□□ 1.25
CHD9-208ENST00000563410 TCEAL8Q8IYN2 117 aa22.89■■□□□ 1.25
CHD9-208ENST00000563410 DDX23Q9BUQ8 820 aaKnown RBP22.89■■□□□ 1.25
CHD9-208ENST00000563410 TUBGCP4Q9UGJ1 667 aa22.89■■□□□ 1.25
CHD9-208ENST00000563410 H7C4K7 107 aa22.88■■□□□ 1.25
CHD9-208ENST00000563410 PTPN2P17706 415 aa22.88■■□□□ 1.25
CHD9-208ENST00000563410 ELF1P32519 619 aa22.88■■□□□ 1.25
CHD9-208ENST00000563410 NCKAP1LP55160 1127 aa22.88■■□□□ 1.25
CHD9-208ENST00000563410 ARPP19P56211 112 aa22.88■■□□□ 1.25
CHD9-208ENST00000563410 SLC44A4Q53GD3 710 aa22.88■■□□□ 1.25
CHD9-208ENST00000563410 LRRC15Q8TF66 581 aa22.88■■□□□ 1.25
CHD9-208ENST00000563410 MCRS1Q96EZ8 462 aa22.88■■□□□ 1.25
CHD9-208ENST00000563410 SHDQ96IW2 340 aa22.88■■□□□ 1.25
CHD9-208ENST00000563410 TBC1D32Q96NH3 1257 aa22.88■■□□□ 1.25
CHD9-208ENST00000563410 DCHS1Q96JQ0 3298 aa22.88■■□□□ 1.25
CHD9-208ENST00000563410 F5P12259 2224 aa22.88■■□□□ 1.25
CHD9-208ENST00000563410 H3BQV1 296 aa22.87■■□□□ 1.25
CHD9-208ENST00000563410 CLDN3O15551 220 aa22.87■■□□□ 1.25
CHD9-208ENST00000563410 LRG1P02750 347 aa22.87■■□□□ 1.25
CHD9-208ENST00000563410 CXCL8P10145 99 aa22.87■■□□□ 1.25
CHD9-208ENST00000563410 CEBPBP17676 345 aa22.87■■□□□ 1.25
CHD9-208ENST00000563410 MLF2Q15773 248 aaPredicted RBP22.87■■□□□ 1.25
CHD9-208ENST00000563410 PRSS36Q5K4E3 855 aa22.87■■□□□ 1.25
CHD9-208ENST00000563410 ADSSL1Q8N142 457 aa22.87■■□□□ 1.25
CHD9-208ENST00000563410 DDX12PQ92771 950 aa22.87■■□□□ 1.25
CHD9-208ENST00000563410 KCNN1Q92952 543 aa22.87■■□□□ 1.25
CHD9-208ENST00000563410 CDK5RAP3Q96JB5 506 aa22.87■■□□□ 1.25
CHD9-208ENST00000563410 PLA2G2FQ9BZM2 168 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms