RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CDY1Q9Y6F8 540 aa8.6□□□□□ -1.03
HERPUD1-206ENST00000563343 ZNF638Q14966 1978 aaKnown RBP8.6□□□□□ -1.03
HERPUD1-206ENST00000563343 PI4KAP42356 2102 aa8.6□□□□□ -1.03
HERPUD1-206ENST00000563343 CITO14578 2027 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 TENM4Q6N022 2769 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 PLXND1Q9Y4D7 1925 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 MYBPHLA2RUH7 354 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 CASTOR2A6NHX0 329 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 C4orf47A7E2U8 309 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 EML1O00423 815 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 SLC27A2O14975 620 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 B4GALT5O43286 388 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 EXTL3O43909 919 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 RPP40O75818 363 aaKnown RBP8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 ERLIN2O94905 339 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 CEACAM1P13688 526 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 USP11P51784 963 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 PSMC5P62195 406 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 SPIRE1Q08AE8 756 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 PCBP1Q15365 356 aaKnown RBP eCLIP8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 Q4G0T1 1027 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 DGKKQ5KSL6 1271 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 SH3PXD2AQ5TCZ1 1133 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 PDXDC1Q6P996 788 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 CDR2LQ86X02 465 aaPredicted RBP8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 ETNPPLQ8TBG4 499 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 SLC7A3Q8WY07 619 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 SMARCD2Q92925 531 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 DDX27Q96GQ7 796 aaKnown RBP8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 CCDC136Q96JN2 1154 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 BBC3Q96PG8 261 aaPredicted RBP8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 XPNPEP1Q9NQW7 623 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 NEUROG3Q9Y4Z2 214 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 BACE2Q9Y5Z0 518 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 PTPRBP23467 1997 aa8.59□□□□□ -1.03
HERPUD1-206ENST00000563343 ANK1P16157 1881 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 CYP3A7-CYP3A51PA0A087WV96 503 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 LNP1A1A4G5 178 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 SLC38A8A6NNN8 435 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 HEPACAM2A8MVW5 462 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 SPECC1L-ADORA2AF8WAN1 911 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 TMEM189-UBE2V1I3L0A0 370 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 CDX4O14627 284 aaPredicted RBP8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 ZNF263O14978 683 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 ASAP2O43150 1006 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 AKAP3O75969 853 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 ABLIM3O94929 683 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 NPTXRO95502 500 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 TDP2O95551 362 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 CSRP1P21291 193 aaKnown RBP8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 CYP3A7P24462 503 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 CTHP32929 405 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 RFC5P40937 340 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 PXNP49023 591 aaPredicted RBP8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 EPHA5P54756 1037 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 POU5F1BQ06416 359 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 FCHO2Q0JRZ9 810 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 ELAVL2Q12926 359 aaKnown RBP8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 CAPSQ13938 189 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 NECTIN1Q15223 517 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 PLK5Q496M5 336 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 SLC8B1Q6J4K2 584 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 C1orf228Q6PIY5 440 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 ZNF461Q8TAF7 563 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 ZSCAN18Q8TBC5 510 aaPredicted RBP8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 CEP170P1Q96L14 293 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 CORO1BQ9BR76 489 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 LSG1Q9H089 658 aaKnown RBP8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 DUSP15Q9H1R2 295 aaPredicted RBP8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 C8orf33Q9H7E9 229 aaPredicted RBP8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 C6orf50Q9HD87 102 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 MSRB2Q9Y3D2 182 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 GPSM3Q9Y4H4 160 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 PPME1Q9Y570 386 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 SHROOM3Q8TF72 1996 aa8.58□□□□□ -1.04
HERPUD1-206ENST00000563343 CELSR3Q9NYQ7 3312 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 CACNA1EQ15878 2313 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 A0A1B0GUA9 196 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 BCLAF3A2AJT9 711 aaKnown RBP8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 ZNF197O14709 1029 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 CHADO15335 359 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 ZBTB43O43298 467 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 HYAL3O43820 417 aaPredicted RBP8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 SEC24AO95486 1093 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 LRG1P02750 347 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 GJA1P17302 382 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 TKTP29401 623 aaKnown RBP8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 ADD1P35611 737 aaKnown RBP8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 QARSP47897 775 aaKnown RBP8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 RBM25P49756 843 aaKnown RBP8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 EXOSC10Q01780 885 aaKnown RBP8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 ROR1Q01973 937 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 EMC2Q15006 297 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 SLC27A1Q6PCB7 646 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 SYNE3Q6ZMZ3 975 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 PDZD3Q86UT5 571 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 PROSER1Q86XN7 944 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 EXOC8Q8IYI6 725 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 HACE1Q8IYU2 909 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms