RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 RNF31Q96EP0 1072 aa5.93□□□□□ -1.46
CHD9-206ENST00000562791 BBC3Q96PG8 261 aaPredicted RBP5.93□□□□□ -1.46
CHD9-206ENST00000562791 RNPEPQ9H4A4 650 aa5.93□□□□□ -1.46
CHD9-206ENST00000562791 FAM30AQ9NZY2 134 aa5.93□□□□□ -1.46
CHD9-206ENST00000562791 RNF181Q9P0P0 153 aa5.93□□□□□ -1.46
CHD9-206ENST00000562791 TUBD1Q9UJT1 453 aa5.93□□□□□ -1.46
CHD9-206ENST00000562791 SALL3Q9BXA9 1300 aa5.93□□□□□ -1.46
CHD9-206ENST00000562791 FANCIQ9NVI1 1328 aa5.93□□□□□ -1.46
CHD9-206ENST00000562791 TCRBV7S2A1N4TA0A589 114 aa5.92□□□□□ -1.46
CHD9-206ENST00000562791 CDHR4A6H8M9 788 aa5.92□□□□□ -1.46
CHD9-206ENST00000562791 ZFPL1O95159 310 aa5.92□□□□□ -1.46
CHD9-206ENST00000562791 DDCP20711 480 aa5.92□□□□□ -1.46
CHD9-206ENST00000562791 MPLP40238 635 aa5.92□□□□□ -1.46
CHD9-206ENST00000562791 INAVAQ3KP66 663 aa5.92□□□□□ -1.46
CHD9-206ENST00000562791 ARMC6Q6NXE6 501 aa5.92□□□□□ -1.46
CHD9-206ENST00000562791 FUBP1Q96AE4 644 aaKnown RBP5.92□□□□□ -1.46
CHD9-206ENST00000562791 Q96MF0 132 aa5.92□□□□□ -1.46
CHD9-206ENST00000562791 REXO4Q9GZR2 422 aaKnown RBP5.92□□□□□ -1.46
CHD9-206ENST00000562791 R3HDMLQ9H3Y0 253 aa5.92□□□□□ -1.46
CHD9-206ENST00000562791 ALG13Q9NP73 1137 aaKnown RBP5.92□□□□□ -1.46
CHD9-206ENST00000562791 HSFX1Q9UBD0 423 aa5.92□□□□□ -1.46
CHD9-206ENST00000562791 MYBBP1AQ9BQG0 1328 aaKnown RBP5.92□□□□□ -1.46
CHD9-206ENST00000562791 TEX33O43247 280 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 GPANK1O95872 356 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 FDXRP22570 491 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 SLC6A4P31645 630 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 PTH2RP49190 550 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 NOMO3P69849 1222 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 MXRA7P84157 204 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 SLFN5Q08AF3 891 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 NOMO2Q5JPE7 1267 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 CYFIP2Q96F07 1278 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 MARS2Q96GW9 593 aaKnown RBP5.91□□□□□ -1.46
CHD9-206ENST00000562791 POLR3GLQ9BT43 218 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 SLC5A4Q9NY91 659 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 TESQ9UGI8 421 aaKnown RBP5.91□□□□□ -1.46
CHD9-206ENST00000562791 KCNE5Q9UJ90 142 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 MCM8Q9UJA3 840 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 INTUQ9ULD6 942 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 NOX1Q9Y5S8 564 aa5.91□□□□□ -1.46
CHD9-206ENST00000562791 KIAA0391O15091 583 aaKnown RBP5.9□□□□□ -1.46
CHD9-206ENST00000562791 ESRRBO95718 433 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 MT-CO1P00395 513 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 BLOC1S1P78537 153 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 TARDBPQ13148 414 aaKnown RBP eCLIP5.9□□□□□ -1.46
CHD9-206ENST00000562791 CLUL1Q15846 466 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 CYP2A13Q16696 494 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 SPDYE7PQ495Y7 208 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 PRR16Q569H4 304 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 ADGRG3Q86Y34 549 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 RHOT1Q8IXI2 618 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 AMOTL1Q8IY63 956 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 C1orf162Q8NEQ5 155 aaPredicted RBP5.9□□□□□ -1.46
CHD9-206ENST00000562791 JADE3Q92613 823 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 ZNF764Q96H86 408 aaPredicted RBP5.9□□□□□ -1.46
CHD9-206ENST00000562791 C7orf25Q9BPX7 421 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 GSTO2Q9H4Y5 243 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 MANSC1Q9H8J5 431 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 TMEM74BQ9NUR3 256 aa5.9□□□□□ -1.46
CHD9-206ENST00000562791 MAST3O60307 1309 aa5.9□□□□□ -1.47
CHD9-206ENST00000562791 ARID4BQ4LE39 1312 aaPredicted RBP5.9□□□□□ -1.47
CHD9-206ENST00000562791 MGST3O14880 152 aa5.89□□□□□ -1.47
CHD9-206ENST00000562791 SBK3P0C264 359 aa5.89□□□□□ -1.47
CHD9-206ENST00000562791 CKBP12277 381 aa5.89□□□□□ -1.47
CHD9-206ENST00000562791 FCER1AP12319 257 aa5.89□□□□□ -1.47
CHD9-206ENST00000562791 C5AR1P21730 350 aa5.89□□□□□ -1.47
CHD9-206ENST00000562791 FBLP22087 321 aaKnown RBP5.89□□□□□ -1.47
CHD9-206ENST00000562791 MPP3Q13368 585 aa5.89□□□□□ -1.47
CHD9-206ENST00000562791 DACT2Q5SW24 774 aa5.89□□□□□ -1.47
CHD9-206ENST00000562791 SIMC1Q8NDZ2 872 aa5.89□□□□□ -1.47
CHD9-206ENST00000562791 BOD1Q96IK1 185 aa5.89□□□□□ -1.47
CHD9-206ENST00000562791 PUS7LQ9H0K6 701 aaKnown RBP5.89□□□□□ -1.47
CHD9-206ENST00000562791 C11orf54Q9H0W9 315 aaPredicted RBP5.89□□□□□ -1.47
CHD9-206ENST00000562791 UNKLQ9H9P5 680 aaKnown RBP5.89□□□□□ -1.47
CHD9-206ENST00000562791 ATP8A1Q9Y2Q0 1164 aa5.89□□□□□ -1.47
CHD9-206ENST00000562791 PCDHGA12O60330 932 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 NDUFS2O75306 463 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 ALAS1P13196 640 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 CXCR5P32302 372 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 WASP42768 502 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 GEN1Q17RS7 908 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 ABCB5Q2M3G0 1257 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 STRIP1Q5VSL9 837 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 PGM2L1Q6PCE3 622 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 NECAB2Q7Z6G3 386 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 FTSJ3Q8IY81 847 aaKnown RBP5.88□□□□□ -1.47
CHD9-206ENST00000562791 FITM2Q8N6M3 262 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 TBC1D15Q8TC07 691 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 TMX3Q96JJ7 454 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 GALNT9Q9HCQ5 603 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 VSX1Q9NZR4 365 aaPredicted RBP5.88□□□□□ -1.47
CHD9-206ENST00000562791 TRHDEQ9UKU6 1024 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 MTO1Q9Y2Z2 717 aaKnown RBP5.88□□□□□ -1.47
CHD9-206ENST00000562791 PCDHGA9Q9Y5G4 932 aaKnown RBP5.88□□□□□ -1.47
CHD9-206ENST00000562791 PCDHGA8Q9Y5G5 932 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 PCDHGA7Q9Y5G6 932 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 PCDHGA6Q9Y5G7 932 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 PCDHGA3Q9Y5H0 932 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 PCDHA13Q9Y5I0 950 aa5.88□□□□□ -1.47
CHD9-206ENST00000562791 FZD9O00144 591 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms