RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 EXTL3O43909 919 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 RANBP6O60518 1105 aaKnown RBP5.92□□□□□ -1.46
CAPN3-211ENST00000562199 SLC22A3O75751 556 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 REC8O95072 547 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 TRIM16O95361 564 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 TBC1D8O95759 1140 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 ATP5BP06576 529 aaKnown RBP5.92□□□□□ -1.46
CAPN3-211ENST00000562199 CYP2A6P11509 494 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-211ENST00000562199 SCG2P13521 617 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 GCFC2P16383 781 aaKnown RBP5.92□□□□□ -1.46
CAPN3-211ENST00000562199 NPR3P17342 541 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 IDUAP35475 653 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 HNF1BP35680 557 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 SOX18P35713 384 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 VPS41P49754 854 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 AP3M2P53677 418 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 SLC26A5P58743 744 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 ATP11AP98196 1134 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 CDK17Q00537 523 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 CAP1Q01518 475 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 SPARCL1Q14515 664 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 MXD4Q14582 209 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-211ENST00000562199 TERF2Q15554 542 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 CRY1Q16526 586 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 PTPN21Q16825 1174 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 CFAP221Q4G0U5 840 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 HEATR6Q6AI08 1181 aaKnown RBP5.92□□□□□ -1.46
CAPN3-211ENST00000562199 GPR139Q6DWJ6 353 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 WDR73Q6P4I2 378 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 CEP57Q86XR8 500 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 NOSTRINQ8IVI9 506 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 MYCT1Q8N699 235 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 PPM1NQ8N819 430 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 ANKRD44Q8N8A2 993 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 ZBTB44Q8NCP5 570 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 CCDC150Q8NCX0 1101 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 B4GALNT2Q8NHY0 566 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 BSNDQ8WZ55 320 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 CASP10Q92851 521 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 UBXN10Q96LJ8 280 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 DMRTB1Q96MA1 342 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 TTC25Q96NG3 672 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 MYLK2Q9H1R3 596 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.92□□□□□ -1.46
CAPN3-211ENST00000562199 AGO4Q9HCK5 861 aaKnown RBP5.92□□□□□ -1.46
CAPN3-211ENST00000562199 USP40Q9NVE5 1235 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 IFT80Q9P2H3 777 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-211ENST00000562199 EXTL2Q9UBQ6 330 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 HOOK1Q9UJC3 728 aaKnown RBP5.92□□□□□ -1.46
CAPN3-211ENST00000562199 TRHDEQ9UKU6 1024 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 ZBTB21Q9ULJ3 1066 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 CLEC4AQ9UMR7 237 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 EFR3BQ9Y2G0 817 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 ZDHHC9Q9Y397 364 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 PCDHGB5Q9Y5G0 923 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 ZFP37Q9Y6Q3 630 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-211ENST00000562199 MYO5BQ9ULV0 1848 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 ALKQ9UM73 1620 aa5.92□□□□□ -1.46
CAPN3-211ENST00000562199 EDC4Q6P2E9 1401 aaKnown RBP5.91□□□□□ -1.46
CAPN3-211ENST00000562199 A0A0B4J269 797 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 VWA5AO00534 786 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 IKBKBO14920 756 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 GPR182O15218 404 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 TXNL1O43396 289 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 ENDOD1O94919 500 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 ZFYP08048 801 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-211ENST00000562199 COL6A2P12110 1019 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 GLB1P16278 677 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 RPL9P32969 192 aaKnown RBP5.91□□□□□ -1.46
CAPN3-211ENST00000562199 ABCG1P45844 678 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 ALDH3A2P51648 485 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 CLNS1AP54105 237 aaKnown RBP5.91□□□□□ -1.46
CAPN3-211ENST00000562199 HADHBP55084 474 aaKnown RBP5.91□□□□□ -1.46
CAPN3-211ENST00000562199 MRPS15P82914 257 aaKnown RBP5.91□□□□□ -1.46
CAPN3-211ENST00000562199 HYAL2Q12891 473 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 CUL2Q13617 745 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 CUL4AQ13619 759 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 PKP1Q13835 747 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 KCNB1Q14721 858 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 PPP2R5EQ16537 467 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 DDR2Q16832 855 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 FUT11Q495W5 492 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 USPL1Q5W0Q7 1092 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 CREB3L3Q68CJ9 461 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 ALG1LQ6GMV1 187 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 SLC30A6Q6NXT4 461 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 FAM173BQ6P4H8 233 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 KLC3Q6P597 504 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 DRICH1Q6PGQ1 229 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-211ENST00000562199 B3GNT6Q6ZMB0 384 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 EPM2AIP1Q7L775 607 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-211ENST00000562199 NKAIN4Q8IVV8 208 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 SPARTQ8N0X7 666 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 TMEM130Q8N3G9 435 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 CRACR2BQ8N4Y2 399 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-211ENST00000562199 RNF10Q8N5U6 811 aaKnown RBP5.91□□□□□ -1.46
CAPN3-211ENST00000562199 GALNT11Q8NCW6 608 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 C7orf57Q8NEG2 295 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 OR13H1Q8NG92 308 aa5.91□□□□□ -1.46
CAPN3-211ENST00000562199 ZNF845Q96IR2 970 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms