RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 PCDHA10Q9Y5I2 948 aa11.71□□□□□ -0.54
NEIL1-202ENST00000561643 MAPK4P31152 587 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 MTMR2Q13614 643 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 SGO2Q562F6 1265 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 C6orf118Q5T5N4 469 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 UBAP2Q5T6F2 1119 aaKnown RBP11.7□□□□□ -0.54
NEIL1-202ENST00000561643 C1orf54Q8WWF1 131 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 FAM84AQ96KN4 292 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 CCDC113Q9H0I3 377 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 PGAP2Q9UHJ9 254 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 ANKRD33BA6NCL7 494 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 ANP32DO95626 131 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 IFI35P80217 286 aaPredicted RBP11.7□□□□□ -0.54
NEIL1-202ENST00000561643 MAP3K10Q02779 954 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 ERMARDQ5T6L9 678 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 SLC39A4Q6P5W5 647 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 CYFIP1Q7L576 1253 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 PHLDB2Q86SQ0 1253 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 CROCCP2Q86T23 111 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 GPD1LQ8N335 351 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 EPS8L3Q8TE67 593 aaKnown RBP11.7□□□□□ -0.54
NEIL1-202ENST00000561643 DDX1Q92499 740 aaKnown RBP11.7□□□□□ -0.54
NEIL1-202ENST00000561643 CHMP6Q96FZ7 201 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 MFSD14AQ96MC6 490 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 FAM213AQ9BRX8 229 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 FAM129AQ9BZQ8 928 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 RPAP3Q9H6T3 665 aaPredicted RBP11.7□□□□□ -0.54
NEIL1-202ENST00000561643 C1orf112Q9NSG2 853 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 CNOT7Q9UIV1 285 aaKnown RBP11.7□□□□□ -0.54
NEIL1-202ENST00000561643 RIPK2O43353 540 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 RARGP13631 454 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 BAATQ14032 418 aaPredicted RBP11.7□□□□□ -0.54
NEIL1-202ENST00000561643 SIX1Q15475 284 aaPredicted RBP11.7□□□□□ -0.54
NEIL1-202ENST00000561643 CLEC16AQ2KHT3 1053 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 SPIRE2Q8WWL2 714 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 ART4Q93070 314 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 ASIC3Q9UHC3 531 aa11.7□□□□□ -0.54
NEIL1-202ENST00000561643 C5orf60A6NFR6 353 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 RASGRF2O14827 1237 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 SNUPNO95149 360 aaKnown RBP11.69□□□□□ -0.54
NEIL1-202ENST00000561643 AGTP01019 485 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 GTF2H1P32780 548 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 RBBP5Q15291 538 aaKnown RBP11.69□□□□□ -0.54
NEIL1-202ENST00000561643 ATP6V0A1Q93050 837 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 FBXL18Q96ME1 805 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 RNF146Q9NTX7 359 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 C15orf41Q9Y2V0 281 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 COL4A5P29400 1685 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 CCND2P30279 289 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 MMP13P45452 471 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 KRT17Q04695 432 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 CXCL9Q07325 125 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 LMBRD2Q68DH5 695 aaPredicted RBP11.69□□□□□ -0.54
NEIL1-202ENST00000561643 SAMD3Q8N6K7 520 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 C12orf50Q8NA57 414 aaPredicted RBP11.69□□□□□ -0.54
NEIL1-202ENST00000561643 PSPC1Q8WXF1 523 aaKnown RBP11.69□□□□□ -0.54
NEIL1-202ENST00000561643 CENPTQ96BT3 561 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 ATG4CQ96DT6 458 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 STMN4Q9H169 189 aaPredicted RBP11.69□□□□□ -0.54
NEIL1-202ENST00000561643 LRRC19Q9H756 370 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 TMEM165Q9HC07 324 aa11.69□□□□□ -0.54
NEIL1-202ENST00000561643 SEPT9Q9UHD8 586 aaPredicted RBP11.69□□□□□ -0.54
NEIL1-202ENST00000561643 ADGRA3Q8IWK6 1321 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 ZNF862O60290 1169 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 SORBS3O60504 671 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 DRD4P21917 467 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 SWSAP1Q6NVH7 229 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 ENOSF1Q7L5Y1 443 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 RDM1Q8NG50 284 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 CPA5Q8WXQ8 436 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 ZNF570Q96NI8 536 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 TRIM7Q9C029 511 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 C17orf75Q9HAS0 396 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 BATF3Q9NR55 127 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 INTS9Q9NV88 658 aaKnown RBP11.68□□□□□ -0.54
NEIL1-202ENST00000561643 GRIN3BO60391 1043 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 NR3C2P08235 984 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 GCNT1Q02742 428 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 TBC1D1Q86TI0 1168 aaPredicted RBP11.68□□□□□ -0.54
NEIL1-202ENST00000561643 TRIM74Q86UV6 250 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 TRIM73Q86UV7 250 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 IFT74Q96LB3 600 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 NTPCRQ9BSD7 190 aaKnown RBP11.68□□□□□ -0.54
NEIL1-202ENST00000561643 EBF2Q9HAK2 575 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 PRDM16Q9HAZ2 1276 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 RIPK3Q9Y572 518 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 PSME4Q14997 1843 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 FSCN2O14926 492 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 DKC1O60832 514 aaKnown RBP eCLIP11.68□□□□□ -0.54
NEIL1-202ENST00000561643 LGR5O75473 907 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 ACSL3O95573 720 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 TNNI1P19237 187 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 RRM1P23921 792 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 CCDC38Q502W7 563 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 C2CD6Q53TS8 623 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 BRDTQ58F21 947 aaPredicted RBP11.68□□□□□ -0.54
NEIL1-202ENST00000561643 WDR44Q5JSH3 913 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 MIS18BP1Q6P0N0 1132 aa11.68□□□□□ -0.54
NEIL1-202ENST00000561643 ILDR2Q71H61 639 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms