RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 KCTD17Q8N5Z5 321 aa27.65■■■□□ 2.02
NME3-202ENST00000561637 RASSF8Q8NHQ8 419 aa27.65■■■□□ 2.02
NME3-202ENST00000561637 SMG7Q92540 1137 aaKnown RBP27.65■■■□□ 2.02
NME3-202ENST00000561637 ACAP3Q96P50 834 aa27.65■■■□□ 2.02
NME3-202ENST00000561637 KCND2Q9NZV8 630 aa27.65■■■□□ 2.02
NME3-202ENST00000561637 TMEM189-UBE2V1I3L0A0 370 aa27.64■■■□□ 2.02
NME3-202ENST00000561637 K7ELQ4 463 aaPredicted RBP27.64■■■□□ 2.02
NME3-202ENST00000561637 SLC26A4O43511 780 aa27.64■■■□□ 2.02
NME3-202ENST00000561637 TOM1L1O75674 476 aa27.64■■■□□ 2.02
NME3-202ENST00000561637 FGFR3P22607 806 aa27.64■■■□□ 2.02
NME3-202ENST00000561637 SMTNP53814 917 aa27.64■■■□□ 2.02
NME3-202ENST00000561637 SPAG1Q07617 926 aa27.64■■■□□ 2.02
NME3-202ENST00000561637 SLC10A6Q3KNW5 377 aa27.64■■■□□ 2.02
NME3-202ENST00000561637 ZBTB41Q5SVQ8 909 aa27.64■■■□□ 2.02
NME3-202ENST00000561637 DCLRE1AQ6PJP8 1040 aa27.64■■■□□ 2.02
NME3-202ENST00000561637 HAUS6Q7Z4H7 955 aa27.64■■■□□ 2.02
NME3-202ENST00000561637 SLC44A3Q8N4M1 653 aa27.64■■■□□ 2.02
NME3-202ENST00000561637 MYADMQ96S97 322 aa27.64■■■□□ 2.02
NME3-202ENST00000561637 TBC1D17Q9HA65 648 aa27.64■■■□□ 2.02
NME3-202ENST00000561637 TOPORSQ9NS56 1045 aaPredicted RBP27.64■■■□□ 2.02
NME3-202ENST00000561637 CEP250Q9BV73 2442 aa27.63■■■□□ 2.01
NME3-202ENST00000561637 FAM13AO94988 1023 aa27.63■■■□□ 2.01
NME3-202ENST00000561637 KCNE1P15382 129 aa27.63■■■□□ 2.01
NME3-202ENST00000561637 ZNF131P52739 623 aa27.63■■■□□ 2.01
NME3-202ENST00000561637 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.63■■■□□ 2.01
NME3-202ENST00000561637 MYCT1Q8N699 235 aa27.63■■■□□ 2.01
NME3-202ENST00000561637 USP28Q96RU2 1077 aa27.63■■■□□ 2.01
NME3-202ENST00000561637 FIZ1Q96SL8 496 aa27.63■■■□□ 2.01
NME3-202ENST00000561637 ZHX3Q9H4I2 956 aa27.63■■■□□ 2.01
NME3-202ENST00000561637 WDR6Q9NNW5 1121 aaKnown RBP27.63■■■□□ 2.01
NME3-202ENST00000561637 CNTN3Q9P232 1028 aa27.63■■■□□ 2.01
NME3-202ENST00000561637 TUBGCP4Q9UGJ1 667 aa27.63■■■□□ 2.01
NME3-202ENST00000561637 FBXW11Q9UKB1 542 aa27.63■■■□□ 2.01
NME3-202ENST00000561637 ODF2LQ9ULJ1 636 aa27.63■■■□□ 2.01
NME3-202ENST00000561637 K7ENM7 598 aa27.62■■■□□ 2.01
NME3-202ENST00000561637 PODXLO00592 558 aa27.62■■■□□ 2.01
NME3-202ENST00000561637 DCNP07585 359 aaKnown RBP27.62■■■□□ 2.01
NME3-202ENST00000561637 CXCL8P10145 99 aa27.62■■■□□ 2.01
NME3-202ENST00000561637 NMT1P30419 496 aaKnown RBP27.62■■■□□ 2.01
NME3-202ENST00000561637 TNFSF9P41273 254 aa27.62■■■□□ 2.01
NME3-202ENST00000561637 MCL1Q07820 350 aa27.62■■■□□ 2.01
NME3-202ENST00000561637 ZPBP2Q6X784 338 aa27.62■■■□□ 2.01
NME3-202ENST00000561637 DCLK2Q8N568 766 aa27.62■■■□□ 2.01
NME3-202ENST00000561637 ST13P5Q8NFI4 369 aaPredicted RBP27.62■■■□□ 2.01
NME3-202ENST00000561637 BICD1Q96G01 975 aa27.62■■■□□ 2.01
NME3-202ENST00000561637 DDX27Q96GQ7 796 aaKnown RBP27.62■■■□□ 2.01
NME3-202ENST00000561637 INTS4Q96HW7 963 aaKnown RBP27.62■■■□□ 2.01
NME3-202ENST00000561637 CCSER1Q9C0I3 900 aa27.62■■■□□ 2.01
NME3-202ENST00000561637 IKZF4Q9H2S9 585 aa27.62■■■□□ 2.01
NME3-202ENST00000561637 LARSQ9P2J5 1176 aaKnown RBP27.62■■■□□ 2.01
NME3-202ENST00000561637 CLUHO75153 1309 aa27.62■■■□□ 2.01
NME3-202ENST00000561637 KRT18P05783 430 aaKnown RBP27.61■■■□□ 2.01
NME3-202ENST00000561637 ELAVL2Q12926 359 aaKnown RBP27.61■■■□□ 2.01
NME3-202ENST00000561637 SLC39A4Q6P5W5 647 aa27.61■■■□□ 2.01
NME3-202ENST00000561637 GPR152Q8TDT2 470 aa27.61■■■□□ 2.01
NME3-202ENST00000561637 LARP4BQ92615 738 aaKnown RBP27.61■■■□□ 2.01
NME3-202ENST00000561637 PLEKHA4Q9H4M7 779 aa27.61■■■□□ 2.01
NME3-202ENST00000561637 DLGAP2Q9P1A6 1054 aa27.61■■■□□ 2.01
NME3-202ENST00000561637 EPS15L1Q9UBC2 864 aa27.61■■■□□ 2.01
NME3-202ENST00000561637 PDCD11Q14690 1871 aaKnown RBP27.61■■■□□ 2.01
NME3-202ENST00000561637 TISP43B9A030 160 aa27.6■■■□□ 2.01
NME3-202ENST00000561637 ZMYND10O75800 440 aa27.6■■■□□ 2.01
NME3-202ENST00000561637 RFX1P22670 979 aa27.6■■■□□ 2.01
NME3-202ENST00000561637 OR1D2P34982 312 aa27.6■■■□□ 2.01
NME3-202ENST00000561637 MATR3P43243 847 aaKnown RBP eCLIP27.6■■■□□ 2.01
NME3-202ENST00000561637 NTHL1P78549 312 aa27.6■■■□□ 2.01
NME3-202ENST00000561637 CREMQ03060 361 aa27.6■■■□□ 2.01
NME3-202ENST00000561637 UROC1Q96N76 676 aa27.6■■■□□ 2.01
NME3-202ENST00000561637 PARVGQ9HBI0 331 aa27.6■■■□□ 2.01
NME3-202ENST00000561637 MTRRQ9UBK8 725 aa27.6■■■□□ 2.01
NME3-202ENST00000561637 TBX20Q9UMR3 447 aa27.6■■■□□ 2.01
NME3-202ENST00000561637 MIA3Q5JRA6 1907 aa27.6■■■□□ 2.01
NME3-202ENST00000561637 NCOR2Q9Y618 2525 aa27.6■■■□□ 2.01
NME3-202ENST00000561637 MYH15Q9Y2K3 1946 aa27.59■■■□□ 2.01
NME3-202ENST00000561637 A0A087X0B3 334 aa27.59■■■□□ 2.01
NME3-202ENST00000561637 CLDN3O15551 220 aa27.59■■■□□ 2.01
NME3-202ENST00000561637 PAPLNO95428 1278 aa27.59■■■□□ 2.01
NME3-202ENST00000561637 SP9P0CG40 484 aa27.59■■■□□ 2.01
NME3-202ENST00000561637 SRFP11831 508 aa27.59■■■□□ 2.01
NME3-202ENST00000561637 GUCY2FP51841 1108 aa27.59■■■□□ 2.01
NME3-202ENST00000561637 HDAC7Q8WUI4 952 aa27.59■■■□□ 2.01
NME3-202ENST00000561637 PRKD2Q9BZL6 878 aa27.59■■■□□ 2.01
NME3-202ENST00000561637 SRPRBQ9Y5M8 271 aaKnown RBP27.59■■■□□ 2.01
NME3-202ENST00000561637 STX6O43752 255 aa27.58■■■□□ 2.01
NME3-202ENST00000561637 FAM189A1O60320 539 aa27.58■■■□□ 2.01
NME3-202ENST00000561637 LIG4P49917 911 aa27.58■■■□□ 2.01
NME3-202ENST00000561637 ZC2HC1CQ53FD0 456 aaPredicted RBP27.58■■■□□ 2.01
NME3-202ENST00000561637 DYMQ7RTS9 669 aa27.58■■■□□ 2.01
NME3-202ENST00000561637 HINFPQ9BQA5 517 aa27.58■■■□□ 2.01
NME3-202ENST00000561637 PIDD1Q9HB75 910 aa27.58■■■□□ 2.01
NME3-202ENST00000561637 SLC38A7Q9NVC3 462 aa27.58■■■□□ 2.01
NME3-202ENST00000561637 ZDHHC7Q9NXF8 308 aa27.58■■■□□ 2.01
NME3-202ENST00000561637 CDY1Q9Y6F8 540 aa27.58■■■□□ 2.01
NME3-202ENST00000561637 COL4A3Q01955 1670 aa27.58■■■□□ 2.01
NME3-202ENST00000561637 CACNA1BQ00975 2339 aa27.57■■■□□ 2
NME3-202ENST00000561637 HNRNPDLO14979 420 aaKnown RBP27.57■■■□□ 2
NME3-202ENST00000561637 CCL16O15467 120 aa27.57■■■□□ 2
NME3-202ENST00000561637 TRAK2O60296 914 aa27.57■■■□□ 2
NME3-202ENST00000561637 TBCAO75347 108 aaKnown RBP27.57■■■□□ 2
NME3-202ENST00000561637 C8AP07357 584 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms