RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 URODP06132 367 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 CYP3A5P20815 502 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 FGFR3P22607 806 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 NDUFV1P49821 464 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 GUCY2FP51841 1108 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 PPP2R3AQ06190 1150 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 FAM171A1Q5VUB5 890 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 SPATA1Q5VX52 437 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 JADE1Q6IE81 842 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 SYCE2Q6PIF2 218 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 SAAL1Q96ER3 474 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 KIF12Q96FN5 646 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 ASB7Q9H672 318 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 UBQLN1Q9UMX0 589 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 UBE4BO95155 1302 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 ANK1P16157 1881 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 VWA8A3KMH1 1905 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 GADD45BO75293 160 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 NFICP08651 508 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 EPCAMP16422 314 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 BRCC3P46736 316 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 ELAVL2Q12926 359 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 PSMD2Q13200 908 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 PTCRAQ6ISU1 281 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 ANKRD54Q6NXT1 300 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 LLGL2Q6P1M3 1020 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 BRSK2Q8IWQ3 736 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 NELFCDQ8IXH7 590 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 EFCAB13Q8IY85 973 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 TMEM87AQ8NBN3 555 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 SMRP1Q8NCR6 262 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 LNX1Q8TBB1 728 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 RIN2Q8WYP3 895 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 PIK3R5Q8WYR1 880 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 FBXL18Q96ME1 805 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 FAM213AQ9BRX8 229 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 TTPALQ9BTX7 342 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 COL25A1Q9BXS0 654 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 S1PR5Q9H228 398 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 PCIF1Q9H4Z3 704 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 EXOC1Q9NV70 894 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 FNIP2Q9P278 1114 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 CD207Q9UJ71 328 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 SSX2IPQ9Y2D8 614 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 DERAQ9Y315 318 aa16.59■□□□□ 0.25
SNRPA1-213ENST00000560856 GOLGA8IPA6NC78 632 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 GOLGA6L4A6NEF3 574 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 GOLGA8JA6NMD2 632 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 I3L4J1 428 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 PPEF2O14830 753 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 MBTPS2O43462 519 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 EXTL3O43909 919 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 RHOBTB3O94955 611 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 LDHAP00338 332 aaKnown RBP16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 IL9P15248 144 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 CA8P35219 290 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 CLCN4P51793 760 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 FAM160A1Q05DH4 1040 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 CLUL1Q15846 466 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 KIAA1841Q6NSI8 718 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 ARMCX5Q6P1M9 558 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 PRSS55Q6UWB4 352 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 FAM212AQ96EL1 285 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 EMILIN2Q9BXX0 1053 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 AGPAT3Q9NRZ7 376 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 C2CD2Q9Y426 696 aa16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-213ENST00000560856 ANO9A1A5B4 782 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 KIAA0391O15091 583 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 RPL17P18621 184 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 KLRC2P26717 231 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 TKTP29401 623 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 AARSP49588 968 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 SNRPFP62306 86 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 SMAD4Q13485 552 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 KCNB1Q14721 858 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 TMEM132DQ14C87 1099 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 KNOP1Q1ED39 458 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 PUS10Q3MIT2 529 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 KANK3Q6NY19 840 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 LILRA6Q6PI73 481 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 PPFIBP1Q86W92 1011 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 C12orf56Q8IXR9 622 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 GPD1LQ8N335 351 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 CASP10Q92851 521 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 SUSD3Q96L08 255 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 TIGD1Q96MW7 591 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 NECAB3Q96P71 396 aaPredicted RBP16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 CLSTN3Q9BQT9 956 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 KCTD10Q9H3F6 313 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 HSPBP1Q9NZL4 362 aa16.57■□□□□ 0.24
SNRPA1-213ENST00000560856 PIRO00625 290 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 CLIC2O15247 247 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 ADAM12O43184 909 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 XPOTO43592 962 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 TRAPPC3O43617 180 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 TBC1D4O60343 1298 aa16.56■□□□□ 0.24
SNRPA1-213ENST00000560856 IL18RAPO95256 599 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms