RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 CARSP49589 748 aaKnown RBP15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 MBTD1Q05BQ5 628 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 CCDC70Q6NSX1 233 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 FMNL3Q8IVF7 1028 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 BRSK2Q8IWQ3 736 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 LMBR1Q8WVP7 490 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 CYFIP2Q96F07 1278 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 SELENOOQ9BVL4 669 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 IFT122Q9HBG6 1241 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 RNF19AQ9NV58 838 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 TARSL2A2RTX5 802 aaKnown RBP15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 H3BRB1 525 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 IGF2BP3O00425 579 aaKnown RBP eCLIP15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 DDX3YO15523 660 aaKnown RBP15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 LDHAP00338 332 aaKnown RBP15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 WEE2P0C1S8 567 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 ORC1Q13415 861 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 LAMC2Q13753 1193 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 ZPBP2Q6X784 338 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 ANKRD23Q86SG2 305 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 SYCE1Q8N0S2 351 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 ZNF564Q8TBZ8 553 aaPredicted RBP15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 C16orf70Q9BSU1 422 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 TUT1Q9H6E5 874 aaKnown RBP15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 KCNG1Q9UIX4 513 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 SIP14410 1827 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 PGRMC1O00264 195 aaKnown RBP15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 KRIT1O00522 736 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 OGTO15294 1046 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 KRT19P08727 400 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 ACO1P21399 889 aaKnown RBP15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 COMTP21964 271 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 GRM1Q13255 1194 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 SND1Q7KZF4 910 aaKnown RBP eCLIP15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 DDX42Q86XP3 938 aaKnown RBP eCLIP15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 PARK7Q99497 189 aaKnown RBP15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 CELF4Q9BZC1 486 aaKnown RBP15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 FAM49AQ9H0Q0 323 aaPredicted RBP15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 NFU1Q9UMS0 254 aa15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 ZC3H4Q9UPT8 1303 aaKnown RBP15.09■□□□□ 0.01
CARMIL3-203ENST00000560349 GPR25O00155 361 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 CLTAP09496 248 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 MCCD1P59942 119 aaPredicted RBP15.08■□□□□ 0
CARMIL3-203ENST00000560349 OR6J1Q8NGC5 347 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 PPTC7Q8NI37 304 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 FAM71BQ8TC56 605 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 NLRP7Q8WX94 980 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 TINF2Q9BSI4 451 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 CDT1Q9H211 546 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 VTA1Q9NP79 307 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 SETD4Q9NVD3 440 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 CNOT8Q9UFF9 292 aaKnown RBP15.08■□□□□ 0
CARMIL3-203ENST00000560349 AMACRQ9UHK6 382 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 ACKR2O00590 384 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 SYF2O95926 243 aaKnown RBP15.08■□□□□ 0
CARMIL3-203ENST00000560349 RRM1P23921 792 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 GNA15P30679 374 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 ABCD1P33897 745 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 RAP1GAPP47736 663 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 GCLCP48506 637 aaPredicted RBP15.08■□□□□ 0
CARMIL3-203ENST00000560349 GUCY2FP51841 1108 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 PTENP60484 403 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 ACVR2BQ13705 512 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 GRB14Q14449 540 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 CCL14Q16627 93 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 MPZL3Q6UWV2 235 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 PLEKHH3Q7Z736 793 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 RBBP8NLQ8NC74 664 aaPredicted RBP15.08■□□□□ 0
CARMIL3-203ENST00000560349 RNPC3Q96LT9 517 aaKnown RBP15.08■□□□□ 0
CARMIL3-203ENST00000560349 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.08■□□□□ 0
CARMIL3-203ENST00000560349 C11orf70Q9BRQ4 267 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 ERVK-5Q9HDB9 667 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 FLRT1Q9NZU1 646 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 MORF4L1Q9UBU8 362 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 NXF1Q9UBU9 619 aaKnown RBP15.08■□□□□ 0
CARMIL3-203ENST00000560349 LCMT1Q9UIC8 334 aa15.08■□□□□ 0
CARMIL3-203ENST00000560349 CPSF3Q9UKF6 684 aaKnown RBP15.08■□□□□ 0
CARMIL3-203ENST00000560349 DYNC1LI2O43237 492 aaPredicted RBP15.07■□□□□ 0
CARMIL3-203ENST00000560349 HOXC6P09630 235 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 FAM153BP0C7A2 387 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 ITIH3Q06033 890 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 MCL1Q07820 350 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 CLEC16AQ2KHT3 1053 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 FAM153CQ494X1 144 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 RHOT2Q8IXI1 618 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 FAM153AQ9UHL3 310 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 DAAM1Q9Y4D1 1078 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 MEFVO15553 781 aaPredicted RBP15.07■□□□□ 0
CARMIL3-203ENST00000560349 THAP12O43422 761 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 NFICP08651 508 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 TMEM191BP0C7N4 346 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 SLC26A2P50443 739 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 KIZQ2M2Z5 673 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 HSP90B2PQ58FF3 399 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 PBKQ96KB5 322 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 TRIM31Q9BZY9 425 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 FZD8Q9H461 694 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 POLIQ9UNA4 740 aa15.07■□□□□ 0
CARMIL3-203ENST00000560349 SART1O43290 800 aaKnown RBP15.06■□□□□ 0
CARMIL3-203ENST00000560349 SPOPO43791 374 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms