RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 KLHDC7AQ5VTJ3 777 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 SMYD5Q6GMV2 418 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 TRIM65Q6PJ69 517 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 SV2AQ7L0J3 742 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 ENOSF1Q7L5Y1 443 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 ZSWIM2Q8NEG5 633 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 BEST2Q8NFU1 509 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 WNT8BQ93098 351 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 VWCEQ96DN2 955 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 NT5C1BQ96P26 610 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 SPAG5Q96R06 1193 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 POP1Q99575 1024 aaKnown RBP6.94□□□□□ -1.3
SPG11-221ENST00000560299 TRAIPQ9BWF2 469 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 IFIH1Q9BYX4 1025 aaKnown RBP6.94□□□□□ -1.3
SPG11-221ENST00000560299 HAPLN2Q9GZV7 340 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 INTS2Q9H0H0 1204 aaKnown RBP6.94□□□□□ -1.3
SPG11-221ENST00000560299 WNT8AQ9H1J5 351 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 ERVK-5Q9HDB9 667 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 C1orf112Q9NSG2 853 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 FAM105AQ9NUU6 356 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 PARP2Q9UGN5 583 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 C2CD2Q9Y426 696 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 LAMA2P24043 3122 aaKnown RBP6.94□□□□□ -1.3
SPG11-221ENST00000560299 TANC1Q9C0D5 1861 aa6.94□□□□□ -1.3
SPG11-221ENST00000560299 A0A0U1RQF3 1178 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 TTC26A0AVF1 554 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 LACTBL1A8MY62 500 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 ZNF623O75123 536 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 EOMESO95936 686 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 C4BPAP04003 597 aaKnown RBP6.93□□□□□ -1.3
SPG11-221ENST00000560299 GYPCP04921 128 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 SKILP12757 684 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 ITGA4P13612 1032 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 P4HA1P13674 534 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 UCHL3P15374 230 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 ATF7P17544 494 aaPredicted RBP6.93□□□□□ -1.3
SPG11-221ENST00000560299 SLC9A1P19634 815 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 TBXAS1P24557 533 aaPredicted RBP6.93□□□□□ -1.3
SPG11-221ENST00000560299 ATICP31939 592 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 ADKP55263 362 aaKnown RBP6.93□□□□□ -1.3
SPG11-221ENST00000560299 KCNMA1Q12791 1236 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 NCOA4Q13772 614 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 GPNMBQ14956 572 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 SGSM1Q2NKQ1 1148 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 SLC10A6Q3KNW5 377 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 EPC2Q52LR7 807 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 PLEKHG4Q58EX7 1191 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 ZBTB41Q5SVQ8 909 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 C1orf220Q5T0J3 134 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 SFMBT2Q5VUG0 894 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 CNKSR3Q6P9H4 555 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 CYP26C1Q6V0L0 522 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 C16orf59Q7L2K0 433 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 RRAGAQ7L523 313 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 TMTC1Q8IUR5 882 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 CEP120Q8N960 986 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 PLEKHO2Q8TD55 490 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 SEPT8Q92599 483 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 TAF4BQ92750 862 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 SYN2Q92777 582 aaPredicted RBP6.93□□□□□ -1.3
SPG11-221ENST00000560299 BADQ92934 168 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 FAXDC2Q96IV6 333 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 RPS6KC1Q96S38 1066 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 BAG1Q99933 345 aaPredicted RBP6.93□□□□□ -1.3
SPG11-221ENST00000560299 ADAM2Q99965 735 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 APOL6Q9BWW8 343 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 EIF2AQ9BY44 585 aaKnown RBP6.93□□□□□ -1.3
SPG11-221ENST00000560299 STK33Q9BYT3 514 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 UBE2OQ9C0C9 1292 aaKnown RBP6.93□□□□□ -1.3
SPG11-221ENST00000560299 AGO3Q9H9G7 860 aaKnown RBP6.93□□□□□ -1.3
SPG11-221ENST00000560299 ABHD10Q9NUJ1 306 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 SLC38A7Q9NVC3 462 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 SNTG2Q9NY99 539 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 APEX2Q9UBZ4 518 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 ITGA11Q9UKX5 1188 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 UBQLN1Q9UMX0 589 aaKnown RBP6.93□□□□□ -1.3
SPG11-221ENST00000560299 GIT1Q9Y2X7 761 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 IPPQ9Y573 584 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 PCDHB2Q9Y5E7 798 aa6.93□□□□□ -1.3
SPG11-221ENST00000560299 BZW2Q9Y6E2 419 aaKnown RBP6.93□□□□□ -1.3
SPG11-221ENST00000560299 CARNS1A5YM72 827 aa6.92□□□□□ -1.3
SPG11-221ENST00000560299 ARHGAP6O43182 974 aa6.92□□□□□ -1.3
SPG11-221ENST00000560299 CCP110O43303 1012 aa6.92□□□□□ -1.3
SPG11-221ENST00000560299 OFD1O75665 1012 aa6.92□□□□□ -1.3
SPG11-221ENST00000560299 RECQL4O94761 1208 aa6.92□□□□□ -1.3
SPG11-221ENST00000560299 IPO7O95373 1038 aaKnown RBP6.92□□□□□ -1.3
SPG11-221ENST00000560299 HLA-DRAP01903 254 aa6.92□□□□□ -1.3
SPG11-221ENST00000560299 FGBP02675 491 aa6.92□□□□□ -1.3
SPG11-221ENST00000560299 KRT19P08727 400 aa6.92□□□□□ -1.3
SPG11-221ENST00000560299 CHRM1P11229 460 aaPredicted RBP6.92□□□□□ -1.3
SPG11-221ENST00000560299 AKAP5P24588 427 aa6.92□□□□□ -1.3
SPG11-221ENST00000560299 MSNP26038 577 aaKnown RBP6.92□□□□□ -1.3
SPG11-221ENST00000560299 STAT1P42224 750 aa6.92□□□□□ -1.3
SPG11-221ENST00000560299 KLK7P49862 253 aa6.92□□□□□ -1.3
SPG11-221ENST00000560299 FXR1P51114 621 aaKnown RBP eCLIP6.92□□□□□ -1.3
SPG11-221ENST00000560299 YWHAEP62258 255 aaKnown RBP6.92□□□□□ -1.3
SPG11-221ENST00000560299 RBP5P82980 135 aa6.92□□□□□ -1.3
SPG11-221ENST00000560299 GCNT1Q02742 428 aa6.92□□□□□ -1.3
SPG11-221ENST00000560299 MYO1EQ12965 1108 aa6.92□□□□□ -1.3
SPG11-221ENST00000560299 PDAP1Q13442 181 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms