RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 MRPL58Q14197 206 aaKnown RBP14.39□□□□□ -0.11
SMAD3-213ENST00000560175 BECN1Q14457 450 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 C15orf39Q6ZRI6 1047 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 EPM2AIP1Q7L775 607 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-213ENST00000560175 GPR149Q86SP6 731 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 TMEM87AQ8NBN3 555 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 HASPINQ8TF76 798 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 C18orf25Q96B23 403 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-213ENST00000560175 NECTIN4Q96NY8 510 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 ACCSQ96QU6 501 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 MSTO1Q9BUK6 570 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 IKZF4Q9H2S9 585 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 PLEKHA4Q9H4M7 779 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 ASB7Q9H672 318 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 SFXN1Q9H9B4 322 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 RPF1Q9H9Y2 349 aaKnown RBP14.39□□□□□ -0.11
SMAD3-213ENST00000560175 FAM13BQ9NYF5 915 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 DPP7Q9UHL4 492 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 KCNH3Q9ULD8 1083 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 EXOC7Q9UPT5 735 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 DERAQ9Y315 318 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 ATP6V1DQ9Y5K8 247 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 BACE2Q9Y5Z0 518 aa14.39□□□□□ -0.11
SMAD3-213ENST00000560175 PVALEFA0A1B0GWK0 134 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 PODXLO00592 558 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 SYN3O14994 580 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 TGM5O43548 720 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 GLUD1P00367 558 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 SLFN14P0C7P3 912 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 MYBP10242 640 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 GARTP22102 1010 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 CA8P35219 290 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 HOXD13P35453 343 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 MTHFRP42898 656 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 AARSP49588 968 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMAD3-213ENST00000560175 RAB33AQ14088 237 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 SPATA1Q5VX52 437 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 CES5AQ6NT32 575 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 PRSS55Q6UWB4 352 aaPredicted RBP14.38□□□□□ -0.11
SMAD3-213ENST00000560175 C12orf76Q8N812 135 aaPredicted RBP14.38□□□□□ -0.11
SMAD3-213ENST00000560175 ZNF507Q8TCN5 953 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 CHAMP1Q96JM3 812 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 SUSD3Q96L08 255 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 SCAND2PQ9GZW5 306 aaPredicted RBP14.38□□□□□ -0.11
SMAD3-213ENST00000560175 TMEM206Q9H813 350 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 TBC1D7Q9P0N9 293 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 MTRRQ9UBK8 725 aa14.38□□□□□ -0.11
SMAD3-213ENST00000560175 AGO2Q9UKV8 859 aaKnown RBP14.38□□□□□ -0.11
SMAD3-213ENST00000560175 UBQLN1Q9UMX0 589 aaKnown RBP14.38□□□□□ -0.11
SMAD3-213ENST00000560175 EIF3DO15371 548 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMAD3-213ENST00000560175 ACTN4O43707 911 aaKnown RBP14.37□□□□□ -0.11
SMAD3-213ENST00000560175 GCNT3O95395 438 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 PAX3P23760 479 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 MATR3P43243 847 aaKnown RBP eCLIP14.37□□□□□ -0.111e-6■■■□□ 17.3
SMAD3-213ENST00000560175 BRCC3P46736 316 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 ACOT2P49753 483 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 PPP2R3AQ06190 1150 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 PSMD5Q16401 504 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 ATAT1Q5SQI0 421 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 KANK3Q6NY19 840 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 ANKS3Q6ZW76 656 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 UNC13DQ70J99 1090 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 RTL10Q7L3V2 364 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 FEZF2Q8TBJ5 459 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 SPATA32Q96LK8 384 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 RIPOR3Q96MK2 946 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 POMKQ9H5K3 350 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 EPHX3Q9H6B9 360 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 MAN1C1Q9NR34 630 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 TUBGCP4Q9UGJ1 667 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 USP25Q9UHP3 1055 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 CDH22Q9UJ99 828 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 USTQ9Y2C2 406 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 C2CD2Q9Y426 696 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 SCN1AP35498 2009 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 DOCK6Q96HP0 2047 aa14.37□□□□□ -0.11
SMAD3-213ENST00000560175 A0A1W2PQ27 194 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 A0A1W2PQ64 194 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 A0A1W2PQD8 194 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 ANO9A1A5B4 782 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 M0QZQ0 153 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 PIRO00625 290 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 ADAM12O43184 909 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 XPOTO43592 962 aaKnown RBP14.36□□□□□ -0.11
SMAD3-213ENST00000560175 LDHAP00338 332 aaKnown RBP14.36□□□□□ -0.11
SMAD3-213ENST00000560175 RPL17P18621 184 aaKnown RBP14.36□□□□□ -0.11
SMAD3-213ENST00000560175 TKTP29401 623 aaKnown RBP14.36□□□□□ -0.11
SMAD3-213ENST00000560175 RARS2Q5T160 578 aaKnown RBP14.36□□□□□ -0.11
SMAD3-213ENST00000560175 SLC8B1Q6J4K2 584 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 RSPO2Q6UXX9 243 aaPredicted RBP14.36□□□□□ -0.11
SMAD3-213ENST00000560175 CEP57Q86XR8 500 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 PALB2Q86YC2 1186 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 NT5DC4Q86YG4 428 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 RNF135Q8IUD6 432 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 GLIS3Q8NEA6 775 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 POMGNT1Q8WZA1 660 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 ZNF707Q96C28 371 aaPredicted RBP14.36□□□□□ -0.11
SMAD3-213ENST00000560175 KIF12Q96FN5 646 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 APOL5Q9BWW9 433 aa14.36□□□□□ -0.11
SMAD3-213ENST00000560175 ZDHHC7Q9NXF8 308 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms