RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 WDR4P57081 412 aaKnown RBP20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 NAA20P61599 178 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 PPIDQ08752 370 aaKnown RBP20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 LPIN1Q14693 890 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 UBE3CQ15386 1083 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 TRIM11Q96F44 468 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 EMILIN3Q9NT22 766 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 ARL8BQ9NVJ2 186 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 CFAP69A5D8W1 941 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 NDC80O14777 642 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 PPEF1O14829 653 aaPredicted RBP20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 DKC1O60832 514 aaKnown RBP eCLIP20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 EPS15P42566 896 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 ACADVLP49748 655 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 EPM2AIP1Q7L775 607 aaPredicted RBP20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 FAM186BQ8IYM0 893 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 KIAA0895Q8NCT3 520 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 OR6Y1Q8NGX8 325 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 ZNF384Q8TF68 577 aa20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 U2AF1L4Q8WU68 220 aaKnown RBP20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 V9GY48 417 aaPredicted RBP20.29■□□□□ 0.84
SEMA4B-215ENST00000560089 MATN2O00339 956 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 EDF1O60869 148 aaKnown RBP20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 RPL5P46777 297 aaKnown RBP20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 AP2B1P63010 937 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 PTK2Q05397 1052 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 ASPHQ12797 758 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 HNRNPDQ14103 355 aaKnown RBP20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 INAQ16352 499 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 KYNUQ16719 465 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 CNNM4Q6P4Q7 775 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 ATP6V0A1Q93050 837 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 USP1O94782 785 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 RXRGP48443 463 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 SPIDRQ14159 915 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 GRIK5Q16478 980 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 TRIM9Q9C026 710 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 CNNM2Q9H8M5 875 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 DNAJC17Q9NVM6 304 aaKnown RBP20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 TELO2Q9Y4R8 837 aa20.28■□□□□ 0.84
SEMA4B-215ENST00000560089 HAUS5O94927 633 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 TTLL1O95922 423 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 CPA3P15088 417 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 PTGIRP43119 386 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 TRAPPC10P48553 1259 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 DYNLL1P63167 89 aaKnown RBP20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 KSR1Q8IVT5 923 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 SCAIQ8N9R8 606 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 NSL1Q96IY1 281 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 FAM161BQ96MY7 647 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 STRBPQ96SI9 672 aaKnown RBP20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 TUBB6Q9BUF5 446 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 ADGRA3Q8IWK6 1321 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 FAM47DPA6NHR8 397 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 C2CD2LO14523 706 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 HOXA10P31260 410 aaPredicted RBP20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 PGM1P36871 562 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 ALKBH5Q6P6C2 394 aaKnown RBP20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 RAPH1Q70E73 1250 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 CROCCP3Q8IVE0 287 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 ARHGAP24Q8N264 748 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 PTCD3Q96EY7 689 aaKnown RBP20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 DRC3Q9H069 523 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 GGA1Q9UJY5 639 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 NUMBLQ9Y6R0 609 aa20.27■□□□□ 0.84
SEMA4B-215ENST00000560089 A0A1W2PRG0 241 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 SH3PXD2BA1X283 911 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 SMIM22K7EJ46 135 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 PODXLO00592 558 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 OXSR1O95747 527 aaPredicted RBP20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 PCSK6P29122 969 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 CHN2P52757 468 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 ARPC4P59998 168 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 ZNF211Q13398 564 aaPredicted RBP20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 NPY5RQ15761 445 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 CCDC153Q494R4 210 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 KCTD21Q4G0X4 260 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 DCAF12L1Q5VU92 463 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 DTHD1Q6ZMT9 781 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 PDSS2Q86YH6 399 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 SAMD3Q8N6K7 520 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 SDR42E1Q8WUS8 393 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 SELENONQ9NZV5 590 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 NAGPAQ9UK23 515 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 IRS2Q9Y4H2 1338 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 KLRG2A4D1S0 409 aaPredicted RBP20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 BBOX1O75936 387 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 UQCRBP14927 111 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 MFSD6Q6ZSS7 791 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 ZNF571Q7Z3V5 609 aaPredicted RBP20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 GIPC3Q8TF64 312 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 LRRC15Q8TF66 581 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 NPHS2Q9NP85 383 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 CLPTM1O96005 669 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 PDK3Q15120 406 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 NADK2Q4G0N4 442 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 RIN3Q8TB24 985 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 PIP4K2CQ8TBX8 421 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 TAS2R1Q9NYW7 299 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms