RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 MAGEA9P43362 315 aa22.51■■□□□ 1.19
PSEN1-225ENST00000560005 PFKPQ01813 784 aa22.51■■□□□ 1.19
PSEN1-225ENST00000560005 GRIN1Q05586 938 aa22.51■■□□□ 1.19
PSEN1-225ENST00000560005 PPM1LQ5SGD2 360 aa22.51■■□□□ 1.19
PSEN1-225ENST00000560005 ZBTB41Q5SVQ8 909 aa22.51■■□□□ 1.19
PSEN1-225ENST00000560005 CEP57L1Q8IYX8 460 aa22.51■■□□□ 1.19
PSEN1-225ENST00000560005 ITFG1Q8TB96 612 aa22.51■■□□□ 1.19
PSEN1-225ENST00000560005 KXD1Q9BQD3 176 aa22.51■■□□□ 1.19
PSEN1-225ENST00000560005 TRIM6Q9C030 488 aaPredicted RBP22.51■■□□□ 1.19
PSEN1-225ENST00000560005 VAV3Q9UKW4 847 aa22.51■■□□□ 1.19
PSEN1-225ENST00000560005 POLIQ9UNA4 740 aa22.51■■□□□ 1.19
PSEN1-225ENST00000560005 INO80B-WBP1J3KQ70 363 aa22.5■■□□□ 1.19
PSEN1-225ENST00000560005 CCL16O15467 120 aa22.5■■□□□ 1.19
PSEN1-225ENST00000560005 SLC37A4O43826 429 aa22.5■■□□□ 1.19
PSEN1-225ENST00000560005 LILRB5O75023 590 aa22.5■■□□□ 1.19
PSEN1-225ENST00000560005 P4HBP07237 508 aaKnown RBP22.5■■□□□ 1.19
PSEN1-225ENST00000560005 C8AP07357 584 aa22.5■■□□□ 1.19
PSEN1-225ENST00000560005 HNRNPA1P09651 372 aaKnown RBP eCLIP22.5■■□□□ 1.19
PSEN1-225ENST00000560005 PTENP60484 403 aa22.5■■□□□ 1.19
PSEN1-225ENST00000560005 NCBP1Q09161 790 aaKnown RBP22.5■■□□□ 1.19
PSEN1-225ENST00000560005 PPP2R5CQ13362 524 aa22.5■■□□□ 1.19
PSEN1-225ENST00000560005 PCBP1Q15365 356 aaKnown RBP eCLIP22.5■■□□□ 1.19
PSEN1-225ENST00000560005 IL17AQ16552 155 aa22.5■■□□□ 1.19
PSEN1-225ENST00000560005 RSPO2Q6UXX9 243 aaPredicted RBP22.5■■□□□ 1.19
PSEN1-225ENST00000560005 POTEDQ86YR6 584 aa22.5■■□□□ 1.19
PSEN1-225ENST00000560005 HACE1Q8IYU2 909 aa22.5■■□□□ 1.19
PSEN1-225ENST00000560005 NELL1Q92832 810 aa22.5■■□□□ 1.19
PSEN1-225ENST00000560005 SLFN14P0C7P3 912 aa22.49■■□□□ 1.19
PSEN1-225ENST00000560005 TGM1P22735 817 aa22.49■■□□□ 1.19
PSEN1-225ENST00000560005 TARSP26639 723 aaKnown RBP22.49■■□□□ 1.19
PSEN1-225ENST00000560005 YWHABP31946 246 aaKnown RBP22.49■■□□□ 1.19
PSEN1-225ENST00000560005 TXKP42681 527 aa22.49■■□□□ 1.19
PSEN1-225ENST00000560005 GRIK3Q13003 919 aa22.49■■□□□ 1.19
PSEN1-225ENST00000560005 TPRG1Q6ZUI0 275 aa22.49■■□□□ 1.19
PSEN1-225ENST00000560005 IGSF22Q8N9C0 903 aa22.49■■□□□ 1.19
PSEN1-225ENST00000560005 HASPINQ8TF76 798 aa22.49■■□□□ 1.19
PSEN1-225ENST00000560005 EPSTI1Q96J88 318 aa22.49■■□□□ 1.19
PSEN1-225ENST00000560005 CLSTN3Q9BQT9 956 aa22.49■■□□□ 1.19
PSEN1-225ENST00000560005 LXNQ9BS40 222 aa22.49■■□□□ 1.19
PSEN1-225ENST00000560005 RTKNQ9BST9 563 aa22.49■■□□□ 1.19
PSEN1-225ENST00000560005 CUEDC2Q9H467 287 aa22.49■■□□□ 1.19
PSEN1-225ENST00000560005 KLK14Q9P0G3 267 aa22.49■■□□□ 1.19
PSEN1-225ENST00000560005 PCDHA12Q9UN75 941 aa22.49■■□□□ 1.19
PSEN1-225ENST00000560005 SF3B1O75533 1304 aaKnown RBP eCLIP22.49■■□□□ 1.196e-7■■■■■ 93.2
PSEN1-225ENST00000560005 CACNA1GO43497 2377 aa22.48■■□□□ 1.19
PSEN1-225ENST00000560005 CHD6Q8TD26 2715 aa22.48■■□□□ 1.19
PSEN1-225ENST00000560005 HSP90AA2PQ14568 343 aaPredicted RBP22.48■■□□□ 1.19
PSEN1-225ENST00000560005 CLDN23Q96B33 292 aa22.48■■□□□ 1.19
PSEN1-225ENST00000560005 CALML4Q96GE6 196 aa22.48■■□□□ 1.19
PSEN1-225ENST00000560005 MTRQ99707 1265 aa22.48■■□□□ 1.19
PSEN1-225ENST00000560005 PAAF1Q9BRP4 392 aa22.48■■□□□ 1.19
PSEN1-225ENST00000560005 MAGEF1Q9HAY2 307 aa22.48■■□□□ 1.19
PSEN1-225ENST00000560005 PARD6AQ9NPB6 346 aa22.48■■□□□ 1.19
PSEN1-225ENST00000560005 KIAA1468Q9P260 1216 aa22.48■■□□□ 1.19
PSEN1-225ENST00000560005 LRWD1Q9UFC0 647 aa22.48■■□□□ 1.19
PSEN1-225ENST00000560005 USP24Q9UPU5 2620 aa22.48■■□□□ 1.19
PSEN1-225ENST00000560005 TBC1D4O60343 1298 aa22.47■■□□□ 1.19
PSEN1-225ENST00000560005 XYLBO75191 536 aa22.47■■□□□ 1.19
PSEN1-225ENST00000560005 ARF4P18085 180 aaPredicted RBP22.47■■□□□ 1.19
PSEN1-225ENST00000560005 HOXA9P31269 272 aa22.47■■□□□ 1.19
PSEN1-225ENST00000560005 MBTD1Q05BQ5 628 aa22.47■■□□□ 1.19
PSEN1-225ENST00000560005 PSMD5Q16401 504 aa22.47■■□□□ 1.19
PSEN1-225ENST00000560005 AMHR2Q16671 573 aa22.47■■□□□ 1.19
PSEN1-225ENST00000560005 ST3GAL2Q16842 350 aa22.47■■□□□ 1.19
PSEN1-225ENST00000560005 XKR9Q5GH70 373 aa22.47■■□□□ 1.19
PSEN1-225ENST00000560005 CDR2LQ86X02 465 aaPredicted RBP22.47■■□□□ 1.19
PSEN1-225ENST00000560005 C4orf19Q8IY42 314 aa22.47■■□□□ 1.19
PSEN1-225ENST00000560005 RASSF8Q8NHQ8 419 aa22.47■■□□□ 1.19
PSEN1-225ENST00000560005 TTPALQ9BTX7 342 aa22.47■■□□□ 1.19
PSEN1-225ENST00000560005 TTC12Q9H892 705 aaPredicted RBP22.47■■□□□ 1.19
PSEN1-225ENST00000560005 KCNMB3Q9NPA1 279 aa22.47■■□□□ 1.19
PSEN1-225ENST00000560005 PRMT8Q9NR22 394 aaPredicted RBP22.47■■□□□ 1.19
PSEN1-225ENST00000560005 ARID2Q68CP9 1835 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 ZBTB39O15060 712 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 ADAM12O43184 909 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 SMC2O95347 1197 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 NPTXRO95502 500 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 MXD4Q14582 209 aaPredicted RBP22.46■■□□□ 1.19
PSEN1-225ENST00000560005 FAM171A1Q5VUB5 890 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 RRAGBQ5VZM2 374 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 KRT79Q5XKE5 535 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 USP49Q70CQ1 688 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 OTUD6AQ7L8S5 288 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 CEP57Q86XR8 500 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 NPAS3Q8IXF0 933 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 LNX1Q8TBB1 728 aaPredicted RBP22.46■■□□□ 1.19
PSEN1-225ENST00000560005 SLC7A14Q8TBB6 771 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 ING5Q8WYH8 240 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 PIK3R5Q8WYR1 880 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 NELL2Q99435 816 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 FUCA2Q9BTY2 467 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 XPNPEP1Q9NQW7 623 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 ANO10Q9NW15 660 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 HCFC1R1Q9NWW0 138 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 RGL1Q9NZL6 768 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 PARP2Q9UGN5 583 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 SERTAD1Q9UHV2 236 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 GMEB2Q9UKD1 530 aa22.46■■□□□ 1.19
PSEN1-225ENST00000560005 CASTOR2A6NHX0 329 aa22.45■■□□□ 1.18
PSEN1-225ENST00000560005 NCAM2O15394 837 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms