RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 KRT14P02533 472 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 NUDT17P0C025 328 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 PYGMP11217 842 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 MAPK4P31152 587 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 COILP38432 576 aaPredicted RBP8.64□□□□□ -1.03
SMAD3-212ENST00000559937 NSFP46459 744 aaKnown RBP8.64□□□□□ -1.03
SMAD3-212ENST00000559937 MARCKSL1P49006 195 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 GNGT1P63211 74 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 C1QBPQ07021 282 aaKnown RBP8.64□□□□□ -1.03
SMAD3-212ENST00000559937 PPIL2Q13356 520 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 ZNF211Q13398 564 aaPredicted RBP8.64□□□□□ -1.03
SMAD3-212ENST00000559937 CAPSQ13938 189 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 SIX1Q15475 284 aaPredicted RBP8.64□□□□□ -1.03
SMAD3-212ENST00000559937 TRADDQ15628 312 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 CEP85LQ5SZL2 805 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 TREML2Q5T2D2 321 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 NAA35Q5VZE5 725 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 GADL1Q6ZQY3 521 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 MON1BQ7L1V2 547 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 PLPPR4Q7Z2D5 763 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 DDX42Q86XP3 938 aaKnown RBP eCLIP8.64□□□□□ -1.03
SMAD3-212ENST00000559937 PHF13Q86YI8 300 aaPredicted RBP8.64□□□□□ -1.03
SMAD3-212ENST00000559937 ZBTB8OSQ8IWT0 167 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 SULF1Q8IWU6 871 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 ANKRD13AQ8IZ07 590 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 ABRAQ8N0Z2 381 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 UBR7Q8N806 425 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 MAGOHBQ96A72 148 aaKnown RBP8.64□□□□□ -1.03
SMAD3-212ENST00000559937 TRIM51Q9BSJ1 452 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 TMEM109Q9BVC6 243 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 TARS2Q9BW92 718 aaKnown RBP8.64□□□□□ -1.03
SMAD3-212ENST00000559937 CELF4Q9BZC1 486 aaKnown RBP8.64□□□□□ -1.03
SMAD3-212ENST00000559937 IMPG2Q9BZV3 1241 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 HAPLN2Q9GZV7 340 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 CCDC113Q9H0I3 377 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 TSPYL1Q9H0U9 437 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 DPH5Q9H2P9 285 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 AZI2Q9H6S1 392 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 MRPL47Q9HD33 250 aaKnown RBP8.64□□□□□ -1.03
SMAD3-212ENST00000559937 HOMER3Q9NSC5 361 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 MTRF1LQ9UGC7 380 aaKnown RBP8.64□□□□□ -1.03
SMAD3-212ENST00000559937 AGTPBP1Q9UPW5 1226 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.64□□□□□ -1.03
SMAD3-212ENST00000559937 NR2E1Q9Y466 385 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 TELO2Q9Y4R8 837 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 SCN4AP35499 1836 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 CITO14578 2027 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 PTPRJQ12913 1337 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 MROH7Q68CQ1 1323 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 ATXN2Q99700 1313 aaKnown RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 DNAJC25-GNG10A0A024R161 153 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 MYO1FO00160 1098 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 ASAP2O43150 1006 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 ATMINO43313 823 aaPredicted RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 MSCO60682 206 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 CNMDO75829 334 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 PROSCO94903 275 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 LSM8O95777 96 aaKnown RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 ASS1P00966 412 aaKnown RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 NF2P35240 595 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 TCF7P36402 384 aaPredicted RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 ACOT2P49753 483 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 CDR1P51861 262 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 ZNF132P52740 706 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 YWHAEP62258 255 aaKnown RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 NOMO3P69849 1222 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 NOP14P78316 857 aaKnown RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 CAV1Q03135 178 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 TAP1Q03518 808 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 POU5F1BQ06416 359 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 MCL1Q07820 350 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 DHX9Q08211 1270 aaKnown RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 ZNF844Q08AG5 666 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 SLMAPQ14BN4 828 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 PLEKHA7Q6IQ23 1121 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 CCDC137Q6PK04 289 aaKnown RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 ZDHHC24Q6UX98 284 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 HOOK3Q86VS8 718 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 NCAPG2Q86XI2 1143 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 SPATS2Q86XZ4 545 aaKnown RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 RBBP8NLQ8NC74 664 aaPredicted RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 C3orf20Q8ND61 904 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 SHCBP1Q8NEM2 672 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 GRK7Q8WTQ7 553 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 GTF3C2Q8WUA4 911 aaPredicted RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 UBLCP1Q8WVY7 318 aaPredicted RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 PAGR1Q9BTK6 254 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 PI4K2AQ9BTU6 479 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 ASCC2Q9H1I8 757 aaPredicted RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 PLEKHA4Q9H4M7 779 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 GRHL1Q9NZI5 618 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 WHRNQ9P202 907 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 FEZ2Q9UHY8 353 aaPredicted RBP8.63□□□□□ -1.03
SMAD3-212ENST00000559937 ANAPC7Q9UJX3 599 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 FZD1Q9UP38 647 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 PCDHB4Q9Y5E5 795 aa8.63□□□□□ -1.03
SMAD3-212ENST00000559937 UMODL1Q5DID0 1318 aa8.62□□□□□ -1.03
SMAD3-212ENST00000559937 TULP2O00295 520 aa8.62□□□□□ -1.03
SMAD3-212ENST00000559937 CLDN3O15551 220 aa8.62□□□□□ -1.03
SMAD3-212ENST00000559937 FAM189A1O60320 539 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms